The 2.0 version of rSNPBase

Variant report

Variant rs41294013
Chromosome Location chr10:5991344-5991345
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5969600-6012000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr10:5971400-6013200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr10:5980000-6013200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr10:5980800-5994600 Weak transcription Gastric stomach
5 chr10:5980800-6017800 Weak transcription Thymus Thymus
6 chr10:5981000-6003600 Weak transcription Primary T cells from cord blood blood
7 chr10:5982800-5995000 Weak transcription GM12878-XiMat blood
8 chr10:5986200-5991400 Weak transcription Right Ventricle heart
9 chr10:5986200-6018600 Weak transcription Aorta Aorta
10 chr10:5986800-5995600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr10:5987000-5994600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr10:5987600-5992400 Weak transcription Brain Angular Gyrus brain
13 chr10:5987600-6018000 Weak transcription Psoas Muscle Psoas
14 chr10:5987800-5992400 Weak transcription Esophagus oesophagus
15 chr10:5987800-5993600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr10:5987800-6017800 Weak transcription Fetal Thymus thymus
17 chr10:5988000-5994000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr10:5988000-5995000 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr10:5988000-6000800 Weak transcription Colonic Mucosa Colon
20 chr10:5988000-6001400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr10:5988200-5992200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr10:5988200-5993600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr10:5988200-5994200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr10:5988200-5994600 Weak transcription Primary B cells from peripheral blood blood
25 chr10:5988200-5998600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr10:5988200-6001800 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr10:5988400-5991400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:5988400-5992000 Weak transcription Hela-S3 cervix
29 chr10:5988400-5992200 Weak transcription NH-A brain
30 chr10:5988400-5992400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr10:5988400-5992400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr10:5988400-5992400 Weak transcription Osteobl bone
33 chr10:5988400-5992600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr10:5988400-5992800 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr10:5988400-5993200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr10:5988400-5994000 Weak transcription Primary T cells fromperipheralblood blood
37 chr10:5988400-5994000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr10:5988400-5994000 Weak transcription Duodenum Mucosa Duodenum
39 chr10:5988400-5994400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr10:5988400-6001200 Weak transcription Ovary ovary
41 chr10:5988400-6001600 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr10:5988600-5992200 Weak transcription HMEC breast
43 chr10:5988600-5992400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr10:5988600-5992400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr10:5988600-5992400 Weak transcription NHDF-Ad bronchial
46 chr10:5988600-5992600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr10:5988600-5992600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr10:5988600-5993200 Weak transcription Small Intestine intestine
49 chr10:5988600-5994000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr10:5988600-6011800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015