The 2.0 version of rSNPBase

Variant report

Variant rs41294015
Chromosome Location chr10:5991569-5991570
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5969600-6012000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr10:5971400-6013200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr10:5980000-6013200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr10:5980800-5994600 Weak transcription Gastric stomach
5 chr10:5980800-6017800 Weak transcription Thymus Thymus
6 chr10:5981000-6003600 Weak transcription Primary T cells from cord blood blood
7 chr10:5982800-5995000 Weak transcription GM12878-XiMat blood
8 chr10:5986200-6018600 Weak transcription Aorta Aorta
9 chr10:5986800-5995600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr10:5987000-5994600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr10:5987600-5992400 Weak transcription Brain Angular Gyrus brain
12 chr10:5987600-6018000 Weak transcription Psoas Muscle Psoas
13 chr10:5987800-5992400 Weak transcription Esophagus oesophagus
14 chr10:5987800-5993600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr10:5987800-6017800 Weak transcription Fetal Thymus thymus
16 chr10:5988000-5994000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr10:5988000-5995000 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr10:5988000-6000800 Weak transcription Colonic Mucosa Colon
19 chr10:5988000-6001400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr10:5988200-5992200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr10:5988200-5993600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr10:5988200-5994200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr10:5988200-5994600 Weak transcription Primary B cells from peripheral blood blood
24 chr10:5988200-5998600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr10:5988200-6001800 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr10:5988400-5992000 Weak transcription Hela-S3 cervix
27 chr10:5988400-5992200 Weak transcription NH-A brain
28 chr10:5988400-5992400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr10:5988400-5992400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr10:5988400-5992400 Weak transcription Osteobl bone
31 chr10:5988400-5992600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr10:5988400-5992800 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr10:5988400-5993200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr10:5988400-5994000 Weak transcription Primary T cells fromperipheralblood blood
35 chr10:5988400-5994000 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr10:5988400-5994000 Weak transcription Duodenum Mucosa Duodenum
37 chr10:5988400-5994400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr10:5988400-6001200 Weak transcription Ovary ovary
39 chr10:5988400-6001600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr10:5988600-5992200 Weak transcription HMEC breast
41 chr10:5988600-5992400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr10:5988600-5992400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr10:5988600-5992400 Weak transcription NHDF-Ad bronchial
44 chr10:5988600-5992600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr10:5988600-5992600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr10:5988600-5993200 Weak transcription Small Intestine intestine
47 chr10:5988600-5994000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr10:5988600-6011800 Weak transcription Colon Smooth Muscle Colon
49 chr10:5989000-5991600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr10:5989200-5992400 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015