The 2.0 version of rSNPBase

Variant report

Variant rs41295837
Chromosome Location chr1:147131025-147131026
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:147113000-147136200 Weak transcription NH-A brain
2 chr1:147113000-147141400 Weak transcription Fetal Brain Male brain
3 chr1:147114000-147141000 Weak transcription Osteobl bone
4 chr1:147114200-147133800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:147117200-147131800 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr1:147118000-147133800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:147118200-147136600 Weak transcription HSMM muscle
8 chr1:147118800-147136600 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:147119000-147131800 Weak transcription Fetal Heart heart
10 chr1:147119000-147132000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:147119000-147132200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:147119600-147131600 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr1:147120000-147141400 Weak transcription Fetal Thymus thymus
14 chr1:147122000-147141400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:147122400-147132800 Weak transcription Brain Germinal Matrix brain
16 chr1:147122400-147141600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:147124200-147140200 Weak transcription Fetal Kidney kidney
18 chr1:147124200-147140200 Weak transcription HMEC breast
19 chr1:147124200-147141200 Weak transcription Psoas Muscle Psoas
20 chr1:147124400-147132000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:147124400-147132600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:147124400-147133800 Weak transcription Fetal Lung lung
23 chr1:147124400-147136600 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:147124400-147140200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr1:147124400-147141000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:147124400-147141200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:147124400-147141400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:147124600-147141000 Weak transcription A549 lung
29 chr1:147125600-147131600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:147125600-147131800 Strong transcription Liver Liver
31 chr1:147125800-147131600 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr1:147126000-147131800 Strong transcription Primary neutrophils fromperipheralblood blood
33 chr1:147126000-147131800 Strong transcription Stomach Smooth Muscle stomach
34 chr1:147126200-147132000 Strong transcription HepG2 liver
35 chr1:147126400-147140000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr1:147127000-147140800 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr1:147127200-147140800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:147127400-147131200 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:147127400-147133800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:147127400-147133800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:147127400-147136800 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr1:147127400-147140800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr1:147127400-147141200 Weak transcription Primary B cells from peripheral blood blood
44 chr1:147127400-147141400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:147127400-147141400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:147127600-147131200 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:147127800-147141000 Weak transcription Small Intestine intestine
48 chr1:147127800-147141600 Weak transcription Placenta Placenta
49 chr1:147128000-147131200 Weak transcription Brain Hippocampus Middle brain
50 chr1:147128400-147135200 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015