Variant report

Variant rs41301853
Chromosome Location chr6:398965-398966
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:391200-400600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
2 chr6:392000-406400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
3 chr6:394200-401400 Weak transcription Spleen Spleen
4 chr6:394200-403400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:394400-399000 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr6:394400-405800 Genic enhancers Primary B cells from peripheral blood blood
7 chr6:394600-399400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
8 chr6:394600-399800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
9 chr6:395000-399000 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr6:395000-399600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr6:395000-399800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr6:395000-411200 Weak transcription Right Atrium heart
13 chr6:396000-399000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr6:396000-401400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr6:396200-403400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr6:396400-401400 Weak transcription Placenta Amnion Placenta Amnion
17 chr6:397000-400400 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:397000-400400 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
19 chr6:397000-406000 Transcr. at gene 5' and 3' GM12878-XiMat blood
20 chr6:397800-399200 Genic enhancers Primary T cells from cord blood blood
21 chr6:397800-400800 Genic enhancers Primary B cells from cord blood blood
22 chr6:398000-400400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr6:398400-408400 Weak transcription Adipose Nuclei Adipose
24 chr6:398600-399000 ZNF genes & repeats Lung lung
25 chr6:398600-399400 Genic enhancers Primary T cells fromperipheralblood blood
26 chr6:398600-400400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr6:398600-401200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr6:398600-405000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:398600-407400 Weak transcription Rectal Smooth Muscle rectum
30 chr6:398800-399200 Genic enhancers Primary T helper cells fromperipheralblood blood
31 chr6:398800-408200 Weak transcription ES-I3 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links