The 2.0 version of rSNPBase

Variant report

Variant rs4148435
Chromosome Location chr13:95899716-95899717
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95859000-95901000 Weak transcription Aorta Aorta
2 chr13:95859200-95901400 Weak transcription Primary T cells from cord blood blood
3 chr13:95859200-95902200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr13:95861600-95906200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr13:95879200-95907400 Weak transcription Small Intestine intestine
6 chr13:95879200-95914000 Weak transcription Rectal Smooth Muscle rectum
7 chr13:95880600-95922600 Weak transcription Psoas Muscle Psoas
8 chr13:95880800-95902400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr13:95881600-95904000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr13:95884200-95901200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr13:95884800-95906400 Weak transcription Hela-S3 cervix
12 chr13:95887000-95918800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr13:95888000-95909000 Weak transcription Fetal Stomach stomach
14 chr13:95888400-95906800 Weak transcription Gastric stomach
15 chr13:95890000-95907600 Weak transcription Colon Smooth Muscle Colon
16 chr13:95890800-95906400 Weak transcription Osteobl bone
17 chr13:95891800-95908000 Weak transcription Esophagus oesophagus
18 chr13:95892600-95905400 Weak transcription Primary B cells from peripheral blood blood
19 chr13:95893000-95905400 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr13:95895000-95900000 Enhancers Primary hematopoietic stem cells blood
21 chr13:95895400-95900000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr13:95895400-95900000 Strong transcription NHLF lung
23 chr13:95895600-95899800 Weak transcription Spleen Spleen
24 chr13:95896000-95902000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr13:95896200-95923400 Weak transcription Ovary ovary
26 chr13:95897000-95900400 Genic enhancers GM12878-XiMat blood
27 chr13:95897000-95927400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr13:95897200-95900000 Genic enhancers Lung lung
29 chr13:95897400-95900000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr13:95897400-95900000 Strong transcription Skeletal Muscle Male skeletal muscle
31 chr13:95897400-95900600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr13:95897600-95901200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr13:95897800-95900600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr13:95898200-95899800 Enhancers Rectal Mucosa Donor 29 rectum
35 chr13:95898200-95900000 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr13:95898200-95900000 Enhancers Rectal Mucosa Donor 31 rectum
37 chr13:95898200-95900000 Strong transcription NHDF-Ad bronchial
38 chr13:95898200-95900200 Genic enhancers K562 blood
39 chr13:95898600-95900000 Genic enhancers A549 lung
40 chr13:95898800-95906200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr13:95898800-95906600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr13:95898800-95908000 Weak transcription Stomach Smooth Muscle stomach
43 chr13:95898800-95919600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr13:95899000-95900000 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr13:95899000-95900000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr13:95899000-95901000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr13:95899000-95901600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr13:95899000-95903200 Weak transcription Primary monocytes fromperipheralblood blood
49 chr13:95899000-95906000 Weak transcription Muscle Satellite Cultured Cells --
50 chr13:95899000-95910000 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015