Variant report

Variant	rs4151025
Chromosome Location	chr11:36595157-36595158
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs4151027	1.00[JPT][hapmap]
rs5030498	1.00[CEU][hapmap];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv832123	chr11:36582872-36757443	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36586400-36595200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr11:36586600-36595200	Weak transcription	Right Ventricle	heart
3	chr11:36586800-36599400	Weak transcription	Liver	Liver
4	chr11:36586800-36600200	Weak transcription	Stomach Smooth Muscle	stomach
5	chr11:36587200-36595200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr11:36589800-36595200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr11:36589800-36600800	Transcr. at gene 5' and 3'	Dnd41	blood
8	chr11:36590200-36596200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr11:36593200-36597600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr11:36593200-36600800	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
11	chr11:36593600-36595200	Weak transcription	Fetal Intestine Small	intestine
12	chr11:36593600-36598800	Weak transcription	Gastric	stomach
13	chr11:36594800-36595200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr11:36594800-36598400	Transcr. at gene 5' and 3'	Thymus	Thymus
15	chr11:36595000-36595400	Weak transcription	Lung	lung
16	chr11:36595000-36595600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr11:36595000-36596400	Strong transcription	Pancreas	Pancrea
18	chr11:36595000-36596600	Strong transcription	Left Ventricle	heart
19	chr11:36595000-36597400	Strong transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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