Variant report

Variant rs41556216
Chromosome Location chr6:31322885-31322886
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31315800-31323400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:31319600-31323800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr6:31319800-31323600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr6:31320400-31324200 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
5 chr6:31320400-31324800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
6 chr6:31320600-31324000 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
7 chr6:31320600-31324400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
8 chr6:31320600-31324600 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
9 chr6:31320800-31323000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr6:31320800-31324000 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
11 chr6:31320800-31324000 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
12 chr6:31320800-31324200 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
13 chr6:31320800-31325400 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
14 chr6:31321000-31323800 Weak transcription Dnd41 blood
15 chr6:31321000-31324000 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
16 chr6:31321200-31323200 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr6:31321200-31323600 Strong transcription Fetal Intestine Small intestine
18 chr6:31321200-31324000 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
19 chr6:31321200-31324000 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
20 chr6:31321200-31324000 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
21 chr6:31321200-31324000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
22 chr6:31321200-31324000 Transcr. at gene 5' and 3' GM12878-XiMat blood
23 chr6:31321200-31324600 Transcr. at gene 5' and 3' Primary Natural Killer cells fromperipheralblood blood
24 chr6:31321200-31324600 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
25 chr6:31321200-31325000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
26 chr6:31321400-31323000 Strong transcription Fetal Intestine Large intestine
27 chr6:31321400-31323000 Strong transcription Osteobl bone
28 chr6:31321400-31323200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:31321400-31323200 Strong transcription HSMMtube muscle
30 chr6:31321400-31323800 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 1 blood
31 chr6:31321400-31324000 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 2 blood
32 chr6:31321400-31324000 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
33 chr6:31321400-31324000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 31 rectum
34 chr6:31321600-31323800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr6:31321800-31323000 Genic enhancers Colon Smooth Muscle Colon
36 chr6:31321800-31323600 Weak transcription Hela-S3 cervix
37 chr6:31321800-31324000 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
38 chr6:31321800-31324000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr6:31321800-31324000 Transcr. at gene 5' and 3' Colonic Mucosa Colon
40 chr6:31321800-31324200 Transcr. at gene 5' and 3' Thymus Thymus
41 chr6:31322200-31324000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:31322200-31324000 Transcr. at gene 5' and 3' Lung lung
43 chr6:31322200-31324000 Transcr. at gene 5' and 3' Sigmoid Colon Sigmoid Colon
44 chr6:31322200-31324000 Transcr. at gene 5' and 3' Spleen Spleen
45 chr6:31322200-31324200 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
46 chr6:31322400-31323000 Genic enhancers Brain Substantia Nigra brain
47 chr6:31322400-31323000 Genic enhancers Esophagus oesophagus
48 chr6:31322400-31323000 Genic enhancers NHDF-Ad bronchial
49 chr6:31322400-31323200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
50 chr6:31322400-31323200 Transcr. at gene 5' and 3' Right Ventricle heart

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