Variant report

Variant rs416002
Chromosome Location chr6:31938635-31938636
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31927400-31938800 Weak transcription Right Atrium heart
2 chr6:31927600-31939400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:31928000-31938800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr6:31934400-31939200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
5 chr6:31936800-31938800 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
6 chr6:31936800-31939200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:31937200-31938800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr6:31937200-31939200 Genic enhancers Spleen Spleen
9 chr6:31937400-31938800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr6:31937400-31939000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr6:31937400-31939200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:31937600-31938800 Genic enhancers Right Ventricle heart
13 chr6:31937600-31939000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:31937600-31939000 Transcr. at gene 5' and 3' Brain Dorsolateral Prefrontal Cortex brain
15 chr6:31937600-31939000 Genic enhancers Duodenum Smooth Muscle Duodenum
16 chr6:31937800-31938800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr6:31937800-31938800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
18 chr6:31937800-31938800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:31937800-31938800 Genic enhancers Fetal Thymus thymus
20 chr6:31937800-31938800 Genic enhancers Gastric stomach
21 chr6:31937800-31939000 Genic enhancers Cortex derived primary cultured neurospheres brain
22 chr6:31937800-31939200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr6:31937800-31939400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr6:31938000-31938800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:31938000-31938800 Genic enhancers Primary T helper cells PMA-I stimulated --
26 chr6:31938000-31938800 Genic enhancers Brain Anterior Caudate brain
27 chr6:31938000-31938800 Genic enhancers Fetal Stomach stomach
28 chr6:31938000-31939000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:31938000-31939000 Transcr. at gene 5' and 3' NHLF lung
30 chr6:31938000-31939200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr6:31938000-31939200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:31938000-31939200 Weak transcription Aorta Aorta
33 chr6:31938000-31939200 Transcr. at gene 5' and 3' Fetal Adrenal Gland Adrenal Gland
34 chr6:31938000-31939200 Flanking Active TSS Hela-S3 cervix
35 chr6:31938200-31938800 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr6:31938200-31938800 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr6:31938200-31938800 Genic enhancers Primary hematopoietic stem cells short term culture blood
38 chr6:31938200-31938800 Genic enhancers Fetal Intestine Small intestine
39 chr6:31938200-31938800 Genic enhancers Fetal Muscle Trunk muscle
40 chr6:31938200-31938800 Genic enhancers Placenta Placenta
41 chr6:31938200-31938800 Weak transcription Small Intestine intestine
42 chr6:31938200-31938800 Genic enhancers Monocytes-CD14+_RO01746 blood
43 chr6:31938200-31939000 Weak transcription H1 Cell Line embryonic stem cell
44 chr6:31938200-31939000 Weak transcription H9 Cell Line embryonic stem cell
45 chr6:31938200-31939000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr6:31938200-31939000 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr6:31938200-31939000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr6:31938200-31939000 Enhancers Fetal Lung lung
49 chr6:31938200-31939200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr6:31938200-31939200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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