Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116465027..116467074-chr7:116468294..116470935,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1356	0.85[EUR][1000 genomes]
rs28167	0.87[EUR][1000 genomes]
rs28896	0.87[EUR][1000 genomes]
rs41750	0.85[EUR][1000 genomes]
rs41754	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs41758	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs41762	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs41773	0.87[EUR][1000 genomes]
rs41776	0.85[EUR][1000 genomes]
rs41778	0.85[EUR][1000 genomes]
rs41779	0.84[EUR][1000 genomes]
rs41781	0.84[EUR][1000 genomes]
rs41783	0.84[EUR][1000 genomes]
rs41784	0.84[EUR][1000 genomes]
rs41786	0.84[EUR][1000 genomes]
rs41791	0.84[EUR][1000 genomes]
rs41792	0.84[EUR][1000 genomes]
rs41793	0.84[EUR][1000 genomes]
rs42230	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9640774	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831107	chr7:116414734-116649466	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116467800-116474600	Weak transcription	HepG2	liver
2	chr7:116468400-116471400	Strong transcription	Liver	Liver
3	chr7:116468600-116469800	Enhancers	Primary hematopoietic stem cells	blood
4	chr7:116468600-116470000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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