Variant report

Variant	rs423692
Chromosome Location	chr1:153005681-153005682
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:152843263..152844168-chr1:153005237..153006058,6	MCF-7	breast:
2	chr1:152898333..152898906-chr1:153005465..153006016,2	MCF-7	breast:
3	chr1:153005244..153005821-chr1:153164960..153165646,3	MCF-7	breast:
4	chr1:152932933..152933748-chr1:153005112..153006074,3	MCF-7	breast:
5	chr1:152926650..152927561-chr1:153005080..153005744,2	MCF-7	breast:
6	chr1:152890404..152890921-chr1:153005056..153005990,2	MCF-7	breast:
7	chr1:152850201..152851155-chr1:153005077..153005710,4	MCF-7	breast:
8	chr1:152948835..152951226-chr1:153005121..153006755,2	MCF-7	breast:
9	chr1:153005373..153007183-chr1:153162991..153164575,2	MCF-7	breast:
10	chr1:152843289..152844260-chr1:153005064..153006050,2	MCF-7	breast:
11	chr1:152999178..153000779-chr1:153005146..153007947,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000163206	Chromatin interaction

Extended variants
information (count: 280 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:272)

rs_ID	r²[population]
rs1015995	0.92[CEU][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1015996	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10399896	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1048296	1.00[CEU][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10494285	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1055935	0.93[CEU][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10788850	0.93[CEU][hapmap];0.83[EUR][1000 genomes]
rs10788852	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10788853	0.96[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10788854	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10788855	1.00[CEU][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10788856	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10788857	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10888523	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10888524	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10888525	1.00[CEU][hapmap];0.90[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10888526	1.00[CEU][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10888527	0.89[ASN][1000 genomes]
rs11205149	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11205151	0.83[EUR][1000 genomes]
rs11205160	0.82[AMR][1000 genomes]
rs11205164	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11205165	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11205166	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11205167	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11205172	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11205174	1.00[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11205175	1.00[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11205176	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11205177	0.96[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11205183	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs1129654	0.83[EUR][1000 genomes]
rs1129655	0.93[CEU][hapmap];0.82[EUR][1000 genomes]
rs1134220	0.93[CEU][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12024694	0.91[CHB][hapmap]
rs12029168	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12037754	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs12046394	0.91[CHB][hapmap];0.83[JPT][hapmap];0.86[YRI][hapmap]
rs12047630	0.91[CHB][hapmap]
rs12085426	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12195	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1334848	1.00[CEU][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1334849	1.00[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1334850	1.00[CEU][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1338178	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1338180	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1338181	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1413848	0.86[CEU][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1413849	0.92[CEU][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1415959	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1415960	0.89[CEU][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1415961	0.93[CEU][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1415962	0.83[EUR][1000 genomes]
rs1415965	1.00[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1415966	1.00[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1415967	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1415968	0.93[CEU][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1415969	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1415970	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1415971	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1577962	0.83[EUR][1000 genomes]
rs1577963	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1577964	0.83[EUR][1000 genomes]
rs1577965	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1591736	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1611753	0.93[CEU][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1611754	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1611755	0.83[EUR][1000 genomes]
rs1611759	0.93[CEU][hapmap];0.83[EUR][1000 genomes]
rs1611760	0.93[CEU][hapmap];0.83[EUR][1000 genomes]
rs1611762	0.90[CEU][hapmap]
rs1611764	0.92[CEU][hapmap]
rs167452	0.87[CHB][hapmap];0.83[JPT][hapmap];0.81[YRI][hapmap]
rs16834838	0.91[CHB][hapmap]
rs16834871	0.91[CHB][hapmap]
rs1750309	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1890284	0.91[CHB][hapmap]
rs1890285	0.96[CEU][hapmap];0.84[YRI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1933381	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1933382	1.00[CEU][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1933383	0.89[CEU][hapmap];0.84[EUR][1000 genomes]
rs1970328	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1977734	0.82[AMR][1000 genomes]
rs1984197	0.90[CEU][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1984198	0.83[EUR][1000 genomes]
rs1995307	0.91[CHB][hapmap];0.83[JPT][hapmap]
rs1995308	0.82[JPT][hapmap];1.00[ASN][1000 genomes]
rs1999886	0.90[CEU][hapmap];0.82[EUR][1000 genomes]
rs2070963	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2070964	1.00[CEU][hapmap];0.82[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2075739	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2152993	0.89[CEU][hapmap];0.87[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2152994	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2225919	0.93[CEU][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2339489	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2339490	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2339491	0.93[CEU][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2339492	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2339493	0.93[CEU][hapmap];0.81[YRI][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2339494	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2339495	0.93[CEU][hapmap];0.81[YRI][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2339496	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2339501	0.91[CHB][hapmap];0.83[JPT][hapmap]
rs2651413	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2711	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2787629	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2879487	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2879488	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2879489	0.93[CEU][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs310097	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs310098	0.81[CHB][hapmap]
rs310101	0.86[CHB][hapmap];0.83[JPT][hapmap];0.86[YRI][hapmap]
rs310102	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs310104	0.81[CHB][hapmap]
rs310105	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs310107	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs310109	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs310110	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs310114	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs310117	0.82[CHB][hapmap]
rs310124	0.86[ASN][1000 genomes]
rs310126	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3120744	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3181787	1.00[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs368076	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs368912	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs370162	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs372490	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs373451	0.87[CHB][hapmap];0.83[JPT][hapmap]
rs3737867	0.93[CEU][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs374170	0.91[CHB][hapmap];0.83[JPT][hapmap]
rs3753454	0.93[CEU][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs377182	0.86[CHB][hapmap];0.82[YRI][hapmap]
rs377768	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3795381	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3795382	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3806219	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3806221	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3806222	1.00[CEU][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3806223	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3820141	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs382653	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs387930	0.93[CEU][hapmap]
rs394859	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3964619	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs399550	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs402153	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4041401	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs406350	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs407103	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs407448	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs409986	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs418550	0.96[CHB][hapmap];0.83[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs419721	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4240866	0.93[CEU][hapmap];0.82[EUR][1000 genomes]
rs4240867	0.92[CEU][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4240868	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4255332	0.83[EUR][1000 genomes]
rs426147	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs426360	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs427470	0.93[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4314835	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4319267	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4323653	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs435633	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4363385	0.82[ASN][1000 genomes]
rs436621	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4388644	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs440598	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs441229	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4452994	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4478766	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs451939	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs454186	0.96[CHB][hapmap];0.83[JPT][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs454245	0.92[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs454993	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4568784	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4576617	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4610954	0.81[AMR][1000 genomes]
rs472076	1.00[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4845329	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4845331	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4845332	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4845333	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4845334	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4845335	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4845336	1.00[CEU][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4845503	0.82[ASN][1000 genomes]
rs4845504	0.83[EUR][1000 genomes]
rs4845505	0.82[ASN][1000 genomes]
rs4845506	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4845507	0.85[AMR][1000 genomes]
rs4845508	0.84[AMR][1000 genomes]
rs4845509	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4845511	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4845512	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4845513	0.97[ASN][1000 genomes]
rs4845514	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4845515	1.00[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4845517	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4845518	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4845519	1.00[CEU][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4845522	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs489323	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs490553	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs512198	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs529077	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs532743	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs532773	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs546666	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs557553	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs558363	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs559236	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs561143	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs572821	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs574649	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs576941	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs581447	0.93[CEU][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs582345	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs608509	0.93[CEU][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61811862	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61811863	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs649269	0.90[CHB][hapmap];0.81[JPT][hapmap];0.82[YRI][hapmap]
rs653332	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6587716	0.83[EUR][1000 genomes]
rs6587717	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6587719	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs662506	0.89[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6661791	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6665527	0.83[EUR][1000 genomes]
rs6665575	0.83[EUR][1000 genomes]
rs6668215	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6668311	0.89[CEU][hapmap];0.83[EUR][1000 genomes]
rs6668696	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6670614	0.93[CEU][hapmap];0.83[EUR][1000 genomes]
rs6671414	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6671524	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6672735	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6678107	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6679201	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6680624	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6684188	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6685731	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6689609	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6698820	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6704105	0.93[CEU][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6704498	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs678960	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs679378	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs682472	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs682473	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs684305	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs689008	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs71582278	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7417180	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7521181	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7529110	0.83[EUR][1000 genomes]
rs821755	0.92[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs885096	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9325996	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs946095	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs946096	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs946097	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs946098	0.93[CEU][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs946099	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs946100	0.93[CEU][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs946101	0.93[CEU][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9659389	1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9659623	0.93[CEU][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9919227	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9919276	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9919333	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013433	chr1:152619305-153262215	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
2	nsv535170	chr1:152619305-153262215	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
3	nsv1001834	chr1:152648853-153279143	Enhancers Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
4	nsv547899	chr1:152672005-153245082	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
5	nsv1010488	chr1:152901263-153670972	Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	236 gene(s)	inside rSNPs	diseases
6	nsv535171	chr1:152901263-153670972	Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	236 gene(s)	inside rSNPs	diseases
7	nsv533877	chr1:152923645-153468131	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
8	nsv1003756	chr1:152944201-153044621	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:153003200-153008200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr1:153003400-153006200	Flanking Active TSS	NHEK	skin
3	chr1:153004800-153007400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr1:153005200-153005800	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr1:153005200-153006000	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr1:153005400-153005800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:153005400-153006000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr1:153005400-153006000	Enhancers	Placenta	Placenta
9	chr1:153005400-153007800	Enhancers	HMEC	breast
10	chr1:153005600-153006000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
11	chr1:153005600-153006000	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr1:153005600-153006000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr1:153005600-153007800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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