Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10006906	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10021572	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10022833	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10032113	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10434219	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12509549	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12649170	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4283700	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4312783	0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4585337	0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4860428	0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6840548	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6842211	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7670950	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7678046	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7684100	0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9312082	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9997427	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9998476	0.97[EUR][1000 genomes]
rs9998713	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv461377	chr4:62368762-62883431	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv594328	chr4:62368762-62883431	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62575800-62579800	Weak transcription	Fetal Stomach	stomach
2	chr4:62576000-62579600	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr4:62576200-62579200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr4:62578200-62578600	Weak transcription	Aorta	Aorta

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