Variant report

Variant rs430552
Chromosome Location chr21:44837551-44837552
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44830400-44837600 Weak transcription Rectal Smooth Muscle rectum
2 chr21:44830800-44837800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr21:44831400-44838200 Weak transcription HUVEC blood vessel
4 chr21:44831400-44844000 Weak transcription Right Atrium heart
5 chr21:44832400-44837600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr21:44832600-44842200 Weak transcription K562 blood
7 chr21:44833000-44842200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr21:44833200-44838800 Strong transcription HSMMtube muscle
9 chr21:44833200-44842200 Strong transcription Psoas Muscle Psoas
10 chr21:44833200-44844000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr21:44833400-44837600 Strong transcription Gastric stomach
12 chr21:44833600-44838800 Genic enhancers Primary B cells from peripheral blood blood
13 chr21:44833600-44838800 Strong transcription HSMM muscle
14 chr21:44833600-44839000 Strong transcription Muscle Satellite Cultured Cells --
15 chr21:44833600-44839400 Strong transcription HMEC breast
16 chr21:44833600-44842200 Strong transcription Placenta Amnion Placenta Amnion
17 chr21:44833600-44842800 Transcr. at gene 5' and 3' A549 lung
18 chr21:44833800-44839000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr21:44834000-44837600 Weak transcription Stomach Smooth Muscle stomach
20 chr21:44834000-44842800 Strong transcription Duodenum Smooth Muscle Duodenum
21 chr21:44834000-44843800 Strong transcription Liver Liver
22 chr21:44834200-44837800 Weak transcription Brain Substantia Nigra brain
23 chr21:44834400-44837800 Strong transcription Skeletal Muscle Female skeletal muscle
24 chr21:44834400-44843400 Strong transcription Fetal Stomach stomach
25 chr21:44834600-44842200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr21:44834800-44840200 Genic enhancers Fetal Muscle Trunk muscle
27 chr21:44834800-44840400 Strong transcription Lung lung
28 chr21:44834800-44840600 Genic enhancers Fetal Muscle Leg muscle
29 chr21:44834800-44840800 Genic enhancers Breast Myoepithelial Primary Cells Breast
30 chr21:44834800-44841000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr21:44834800-44844000 Weak transcription Fetal Kidney kidney
32 chr21:44835000-44841600 Strong transcription Brain Germinal Matrix brain
33 chr21:44835000-44842200 Strong transcription Right Ventricle heart
34 chr21:44835200-44837600 Weak transcription H9 Cell Line embryonic stem cell
35 chr21:44835200-44837800 Strong transcription Colonic Mucosa Colon
36 chr21:44835200-44841400 Strong transcription Pancreas Pancrea
37 chr21:44835200-44844000 Weak transcription NH-A brain
38 chr21:44835400-44837600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr21:44835400-44841000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr21:44835400-44842200 Strong transcription Fetal Brain Female brain
41 chr21:44835400-44842200 Strong transcription Dnd41 blood
42 chr21:44835400-44842800 Strong transcription Sigmoid Colon Sigmoid Colon
43 chr21:44835600-44837800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr21:44835600-44841800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr21:44835600-44841800 Strong transcription iPS-15b Cell Line embryonic stem cell
46 chr21:44835600-44842200 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr21:44835600-44842200 Strong transcription Placenta Placenta
48 chr21:44835600-44842800 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr21:44835800-44841200 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr21:44835800-44842400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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