The 2.0 version of rSNPBase

Variant report

Variant rs4305671
Chromosome Location chr5:115521523-115521524
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115471600-115521600 Weak transcription Primary B cells from peripheral blood blood
2 chr5:115481400-115536000 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr5:115489200-115526800 Weak transcription Pancreas Pancrea
4 chr5:115489800-115528600 Weak transcription Ovary ovary
5 chr5:115490000-115524400 Weak transcription Left Ventricle heart
6 chr5:115494600-115522200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr5:115495200-115521600 Weak transcription Adipose Nuclei Adipose
8 chr5:115495200-115524400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr5:115497400-115528800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr5:115499200-115527400 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr5:115502400-115524400 Weak transcription Fetal Intestine Large intestine
12 chr5:115502400-115526400 Weak transcription Lung lung
13 chr5:115502800-115521600 Weak transcription Primary T cells from cord blood blood
14 chr5:115508800-115529200 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:115509200-115528400 Weak transcription A549 lung
16 chr5:115509600-115533400 Weak transcription HSMM muscle
17 chr5:115510200-115521600 Weak transcription Primary hematopoietic stem cells blood
18 chr5:115510200-115522000 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr5:115510400-115522000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr5:115510400-115524600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr5:115510400-115526200 Weak transcription Brain Hippocampus Middle brain
22 chr5:115510400-115526800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr5:115511800-115533200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr5:115512000-115529200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr5:115512200-115521600 Weak transcription Primary B cells from cord blood blood
26 chr5:115512200-115526800 Weak transcription Fetal Intestine Small intestine
27 chr5:115515000-115521600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:115517400-115526800 Weak transcription Primary monocytes fromperipheralblood blood
29 chr5:115518200-115529000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr5:115518400-115522200 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr5:115518400-115524200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr5:115518800-115529400 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr5:115518800-115529800 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr5:115518800-115548000 Weak transcription Psoas Muscle Psoas
35 chr5:115519800-115524400 Weak transcription Duodenum Mucosa Duodenum
36 chr5:115520200-115526400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr5:115520400-115524800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr5:115520400-115528800 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr5:115520800-115524200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr5:115520800-115524400 Weak transcription Fetal Muscle Leg muscle
41 chr5:115520800-115527000 Weak transcription Fetal Muscle Trunk muscle
42 chr5:115521000-115523200 Weak transcription Placenta Placenta
43 chr5:115521000-115524400 Weak transcription Aorta Aorta
44 chr5:115521000-115526800 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr5:115521000-115529400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr5:115521200-115530000 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr5:115521400-115522000 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr5:115521400-115522000 Strong transcription Liver Liver
49 chr5:115521400-115522600 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr5:115521400-115528800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015