| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv613693 |
chr9:17147191-17710407 |
Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv471287 |
chr9:17165698-17708814 |
Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv466269 |
chr9:17165698-17710407 |
Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv892674 |
chr9:17631186-17699981 |
Enhancers Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv1016971 |
chr9:17648242-17720176 |
Enhancers Weak transcription Active TSS Flanking Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv1021022 |
chr9:17649360-17723730 |
Enhancers Weak transcription Flanking Active TSS Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv982602 |
chr9:17671844-17676006 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015