Variant report

Variant	rs4360688
Chromosome Location	chr11:15441149-15441150
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10766237	0.89[ASN][1000 genomes]
rs10766239	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10832402	0.81[EUR][1000 genomes]
rs10832403	0.81[EUR][1000 genomes]
rs11023524	0.80[EUR][1000 genomes]
rs11023541	0.89[ASN][1000 genomes]
rs12366069	0.81[EUR][1000 genomes]
rs4456244	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6486237	0.81[EUR][1000 genomes]
rs7109366	0.90[EUR][1000 genomes]
rs7125389	0.90[EUR][1000 genomes]
rs7126103	0.82[EUR][1000 genomes]
rs7934026	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830370	chr11:15142247-15444094	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15440400-15441200	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr11:15440800-15441200	Flanking Active TSS	Fetal Lung	lung
3	chr11:15440800-15441200	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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