Variant report

Variant	rs4367595
Chromosome Location	chr8:121847800-121847801
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12546614	1.00[YRI][hapmap]
rs4339689	0.87[EUR][1000 genomes]
rs4369032	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4565500	0.83[EUR][1000 genomes]
rs4621851	0.81[EUR][1000 genomes]
rs4871135	0.83[EUR][1000 genomes]
rs6469955	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016172	chr8:121679590-121929916	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2762767	chr8:121843465-121849583	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv891423	chr8:121847643-121994660	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121838400-121869800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:121842200-121848200	Weak transcription	Psoas Muscle	Psoas
3	chr8:121846200-121848400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr8:121846800-121849400	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr8:121846800-121850200	Enhancers	Primary T cells from cord blood	blood
6	chr8:121846800-121850800	Enhancers	Primary hematopoietic stem cells	blood
7	chr8:121847200-121849400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr8:121847200-121850000	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr8:121847400-121848800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr8:121847600-121848000	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr8:121847600-121848000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:121847600-121848600	Weak transcription	Primary T helper cells PMA-I stimulated	--
13	chr8:121847600-121848800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr8:121847600-121851200	Enhancers	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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