Variant report

Variant	rs4370471
Chromosome Location	chr7:118733415-118733416
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10264965	0.87[AMR][1000 genomes]
rs10270769	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs12333372	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs28502488	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs28787303	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs4607545	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs6961815	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73718368	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831110	chr7:118543340-118739362	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv889098	chr7:118590050-118896639	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv1825159	chr7:118640865-118842361	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv889099	chr7:118709754-118868426	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3495313	chr7:118731764-118733986	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3495314	chr7:118731764-118733986	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv528448	chr7:118733415-118744450	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4370471	SERPINB1	trans	lymphoblastoid	seeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118724600-118735200	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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