Variant report

Variant	rs437453
Chromosome Location	chr13:86378618-86378619
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1054544	0.85[JPT][hapmap]
rs1337266	0.89[CEU][hapmap];0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2210958	0.88[EUR][1000 genomes]
rs2786177	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3825413	0.89[CEU][hapmap];0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs410729	0.82[AFR][1000 genomes]
rs588790	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs593534	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs629601	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs647409	0.90[EUR][1000 genomes]
rs659223	0.89[EUR][1000 genomes]
rs667264	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs682259	0.91[EUR][1000 genomes]
rs688445	0.81[EUR][1000 genomes]
rs7322136	0.81[EUR][1000 genomes]
rs9319179	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9594053	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037563	chr13:85830511-86414012	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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