Variant report

Variant rs4375909
Chromosome Location chr2:97878195-97878196
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:97780000-97884600 Weak transcription Fetal Stomach stomach
2 chr2:97816200-97881400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:97833400-97882800 Weak transcription Psoas Muscle Psoas
4 chr2:97834600-97883000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:97844600-97879400 Weak transcription Brain Germinal Matrix brain
6 chr2:97846000-97889600 Weak transcription NHLF lung
7 chr2:97847200-97883000 Weak transcription Placenta Placenta
8 chr2:97848000-97884800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:97848000-97884800 Weak transcription Right Ventricle heart
10 chr2:97848000-97886200 Weak transcription H1 Cell Line embryonic stem cell
11 chr2:97849800-97879000 Weak transcription Fetal Intestine Small intestine
12 chr2:97850200-97898800 Weak transcription Small Intestine intestine
13 chr2:97855600-97897000 Weak transcription Spleen Spleen
14 chr2:97857600-97884600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr2:97858600-97878600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr2:97860400-97880200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:97861000-97878400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr2:97863800-97886000 Weak transcription HepG2 liver
19 chr2:97863800-97891600 Weak transcription Liver Liver
20 chr2:97863800-97896800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr2:97863800-97899000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:97864000-97884800 Weak transcription GM12878-XiMat blood
23 chr2:97864000-97893400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr2:97864000-97911600 Weak transcription Colonic Mucosa Colon
25 chr2:97864200-97899000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr2:97866000-97884800 Weak transcription NHEK skin
27 chr2:97866400-97878800 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr2:97866400-97885200 Weak transcription Aorta Aorta
29 chr2:97866600-97884200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr2:97866600-97886200 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr2:97866600-97888200 Weak transcription Pancreas Pancrea
32 chr2:97866800-97885600 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr2:97866800-97902200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:97867000-97880200 Weak transcription Placenta Amnion Placenta Amnion
35 chr2:97867200-97883200 Weak transcription Primary T cells from cord blood blood
36 chr2:97867200-97902200 Weak transcription Brain Substantia Nigra brain
37 chr2:97868000-97889800 Weak transcription HSMM muscle
38 chr2:97868600-97902000 Weak transcription Colon Smooth Muscle Colon
39 chr2:97868800-97886400 Weak transcription Primary monocytes fromperipheralblood blood
40 chr2:97868800-97897000 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:97869000-97879400 Weak transcription Primary B cells from cord blood blood
42 chr2:97869000-97889600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr2:97869200-97896800 Weak transcription Fetal Muscle Trunk muscle
44 chr2:97871800-97900800 Weak transcription A549 lung
45 chr2:97873800-97878200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr2:97874000-97878800 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr2:97874000-97884600 Strong transcription Dnd41 blood
48 chr2:97874400-97878200 Strong transcription Brain Angular Gyrus brain
49 chr2:97874400-97878800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:97874600-97878400 Strong transcription Primary T helper cells PMA-I stimulated --

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