The 2.0 version of rSNPBase

Variant report

Variant rs4378418
Chromosome Location chr11:75813537-75813538
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75771800-75827000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr11:75779400-75813600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:75779400-75827000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr11:75779600-75813800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr11:75779800-75826600 Weak transcription Fetal Thymus thymus
6 chr11:75780400-75827000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr11:75785800-75827200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr11:75789000-75827200 Weak transcription Liver Liver
9 chr11:75789400-75846400 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr11:75795000-75830000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr11:75795200-75813800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr11:75797200-75820400 Weak transcription Brain Hippocampus Middle brain
13 chr11:75798400-75818000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr11:75798600-75813800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr11:75798800-75827000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr11:75799400-75817800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:75801200-75827000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr11:75801400-75826000 Weak transcription Primary T cells from cord blood blood
19 chr11:75801600-75815600 Weak transcription Stomach Smooth Muscle stomach
20 chr11:75801600-75826200 Weak transcription Primary monocytes fromperipheralblood blood
21 chr11:75802000-75824200 Weak transcription Primary hematopoietic stem cells blood
22 chr11:75802000-75826200 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr11:75802800-75813600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr11:75802800-75834000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr11:75803400-75822200 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr11:75806200-75813800 Weak transcription Gastric stomach
27 chr11:75807000-75813800 Strong transcription Primary B cells from cord blood blood
28 chr11:75808000-75827400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr11:75808200-75813600 Weak transcription Pancreas Pancrea
30 chr11:75808200-75814000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr11:75808400-75827000 Weak transcription Placenta Placenta
32 chr11:75810200-75813800 Weak transcription Lung lung
33 chr11:75810200-75814000 Weak transcription GM12878-XiMat blood
34 chr11:75810400-75818800 Weak transcription Primary B cells from peripheral blood blood
35 chr11:75812000-75826200 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr11:75812600-75816200 Enhancers Fetal Lung lung
37 chr11:75813000-75814400 Enhancers Adipose Nuclei Adipose
38 chr11:75813200-75814000 Enhancers HUVEC blood vessel
39 chr11:75813400-75813600 Enhancers Spleen Spleen
40 chr11:75813400-75814000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr11:75813400-75814000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr11:75813400-75814200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr11:75813400-75814200 Enhancers Brain Angular Gyrus brain
44 chr11:75813400-75814200 Enhancers Duodenum Smooth Muscle Duodenum
45 chr11:75813400-75814200 Enhancers Fetal Muscle Leg muscle
46 chr11:75813400-75814200 Enhancers Left Ventricle heart
47 chr11:75813400-75814200 Enhancers Right Ventricle heart
48 chr11:75813400-75814400 Enhancers Duodenum Mucosa Duodenum
49 chr11:75813400-75814400 Enhancers Fetal Heart heart
50 chr11:75813400-75814400 Enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015