Variant report

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016813	chr7:25405859-26150509	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
2	nsv538803	chr7:25405859-26150509	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
3	nsv1020230	chr7:25649344-25783071	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
4	esv2753233	chr7:25655060-25771160	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25700000-25710000	Weak transcription	Aorta	Aorta
2	chr7:25703000-25708800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr7:25703000-25710000	Weak transcription	Fetal Muscle Trunk	muscle
4	chr7:25703200-25708600	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr7:25704000-25709000	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr7:25704000-25709200	Weak transcription	Psoas Muscle	Psoas
7	chr7:25704000-25709200	Weak transcription	Right Atrium	heart
8	chr7:25704200-25709000	Weak transcription	Fetal Lung	lung
9	chr7:25704400-25708600	Weak transcription	Duodenum Mucosa	Duodenum
10	chr7:25705400-25708000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr7:25705400-25708600	Weak transcription	Fetal Muscle Leg	muscle
12	chr7:25705400-25709200	Weak transcription	Stomach Smooth Muscle	stomach
13	chr7:25705400-25709800	Weak transcription	Ovary	ovary
14	chr7:25705800-25708600	Weak transcription	Adipose Nuclei	Adipose
15	chr7:25705800-25709200	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr7:25705800-25709400	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr7:25706000-25708600	Weak transcription	Fetal Kidney	kidney
18	chr7:25706000-25708800	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr7:25706000-25709400	Weak transcription	Colon Smooth Muscle	Colon
20	chr7:25706400-25709200	Weak transcription	Rectal Smooth Muscle	rectum
21	chr7:25706600-25708400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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