The 2.0 version of rSNPBase

Variant report

Variant rs4381261
Chromosome Location chr1:213371573-213371574
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213301000-213374800 Weak transcription HSMM muscle
2 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:213328200-213387200 Weak transcription Spleen Spleen
4 chr1:213337800-213374400 Weak transcription Muscle Satellite Cultured Cells --
5 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
6 chr1:213345600-213404600 Weak transcription Osteobl bone
7 chr1:213346200-213387400 Weak transcription Gastric stomach
8 chr1:213350400-213383200 Weak transcription Placenta Placenta
9 chr1:213357800-213387200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:213358000-213375000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:213360400-213373200 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr1:213360400-213405200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:213360600-213378000 Weak transcription Stomach Smooth Muscle stomach
14 chr1:213360800-213372200 Weak transcription Left Ventricle heart
15 chr1:213361600-213386600 Weak transcription Aorta Aorta
16 chr1:213362200-213415400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:213362800-213372400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr1:213364400-213372800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:213367000-213372200 Weak transcription Ovary ovary
20 chr1:213368200-213378200 Weak transcription K562 blood
21 chr1:213368200-213386600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:213368200-213387200 Weak transcription Lung lung
23 chr1:213369600-213388800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:213369800-213398200 Weak transcription Fetal Heart heart
25 chr1:213370000-213374400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:213370400-213371600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
27 chr1:213370400-213372000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
28 chr1:213370600-213380200 Weak transcription Fetal Stomach stomach
29 chr1:213370800-213371600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
30 chr1:213370800-213371800 ZNF genes & repeats Fetal Lung lung
31 chr1:213370800-213372200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:213370800-213372800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
33 chr1:213370800-213380600 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:213370800-213427600 Weak transcription Rectal Smooth Muscle rectum
35 chr1:213371000-213371600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:213371000-213371600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:213371000-213371600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:213371000-213371800 ZNF genes & repeats Adipose Nuclei Adipose
39 chr1:213371000-213373000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:213371000-213373000 ZNF genes & repeats Primary T cells from cord blood blood
41 chr1:213371000-213373200 ZNF genes & repeats Primary B cells from cord blood blood
42 chr1:213371000-213389400 Weak transcription Right Ventricle heart
43 chr1:213371200-213371600 ZNF genes & repeats Primary hematopoietic stem cells blood
44 chr1:213371200-213371600 ZNF genes & repeats Brain Inferior Temporal Lobe brain
45 chr1:213371200-213371800 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
46 chr1:213371200-213372600 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr1:213371200-213372600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
48 chr1:213371200-213372800 ZNF genes & repeats Liver Liver
49 chr1:213371400-213371600 ZNF genes & repeats Primary T cells fromperipheralblood blood
50 chr1:213371400-213371800 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015