Variant report

Variant rs4419278
Chromosome Location chr20:52442932-52442933
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:52426200-52456200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr20:52440000-52444800 Weak transcription Thymus Thymus
3 chr20:52440800-52445400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr20:52441000-52443000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr20:52441000-52445000 Enhancers Fetal Stomach stomach
6 chr20:52441200-52446000 Enhancers HepG2 liver
7 chr20:52441400-52443200 Weak transcription Fetal Intestine Small intestine
8 chr20:52441400-52443200 Enhancers A549 lung
9 chr20:52441400-52443800 Weak transcription Primary hematopoietic stem cells blood
10 chr20:52441600-52444600 Weak transcription Colon Smooth Muscle Colon
11 chr20:52441600-52445200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr20:52441800-52443400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr20:52441800-52444400 Enhancers Fetal Lung lung
14 chr20:52442000-52443600 Weak transcription Small Intestine intestine
15 chr20:52442000-52444600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr20:52442200-52443400 Weak transcription Primary T cells from cord blood blood
17 chr20:52442200-52443600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr20:52442400-52443400 Weak transcription Fetal Kidney kidney
19 chr20:52442400-52443600 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr20:52442400-52444800 Weak transcription Stomach Mucosa stomach
21 chr20:52442400-52445000 Weak transcription Duodenum Mucosa Duodenum
22 chr20:52442600-52443400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr20:52442600-52443800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
24 chr20:52442600-52445400 Enhancers Primary B cells from peripheral blood blood
25 chr20:52442800-52443000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr20:52442800-52443600 Weak transcription Pancreas Pancrea
27 chr20:52442800-52443800 Enhancers NHDF-Ad bronchial
28 chr20:52442800-52444600 Weak transcription H1 Cell Line embryonic stem cell
29 chr20:52442800-52445400 Enhancers Fetal Thymus thymus

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