Variant report
Variant | rs4425278 |
---|---|
Chromosome Location | chr3:161709943-161709944 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1027921 | 0.83[ASN][1000 genomes] |
rs12638318 | 0.81[ASN][1000 genomes] |
rs1355290 | 0.85[ASN][1000 genomes] |
rs1397238 | 0.83[ASN][1000 genomes] |
rs1397239 | 0.83[ASN][1000 genomes] |
rs1510346 | 0.83[ASN][1000 genomes] |
rs2136712 | 0.83[ASN][1000 genomes] |
rs2175265 | 0.83[ASN][1000 genomes] |
rs4241432 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4241433 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4241434 | 0.86[ASN][1000 genomes] |
rs4312667 | 0.86[ASN][1000 genomes] |
rs4575917 | 0.81[ASN][1000 genomes] |
rs4602407 | 0.85[ASN][1000 genomes] |
rs4856663 | 0.98[ASN][1000 genomes] |
rs4856740 | 0.81[ASN][1000 genomes] |
rs4856742 | 0.96[ASN][1000 genomes] |
rs4856743 | 0.86[ASN][1000 genomes] |
rs6778769 | 0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs6789450 | 0.81[ASN][1000 genomes] |
rs7618729 | 0.98[ASN][1000 genomes] |
rs7635026 | 0.85[ASN][1000 genomes] |
rs7637441 | 0.81[ASN][1000 genomes] |
rs9814837 | 0.87[ASN][1000 genomes] |
rs9819461 | 0.83[ASN][1000 genomes] |
rs9820734 | 0.81[ASN][1000 genomes] |
rs9883680 | 0.83[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv533237 | chr3:161019834-161804660 | Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 91 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:161708800-161710200 | Enhancers | NHDF-Ad | bronchial |
2 | chr3:161708800-161710400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |