Variant report

Variant	rs4433191
Chromosome Location	chr8:121643985-121643986
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10093840	1.00[CEU][hapmap];1.00[GIH][hapmap];0.81[JPT][hapmap];0.90[TSI][hapmap];0.91[EUR][1000 genomes]
rs10111936	0.88[CEU][hapmap]
rs12675712	0.90[TSI][hapmap]
rs4409432	0.82[TSI][hapmap]
rs4475531	0.90[TSI][hapmap]
rs4510903	1.00[CEU][hapmap];0.88[CHB][hapmap];0.91[EUR][1000 genomes]
rs4870736	1.00[CEU][hapmap];0.92[GIH][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs5019650	0.91[EUR][1000 genomes]
rs57160393	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6469938	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs6986718	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6996625	1.00[CEU][hapmap];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891421	chr8:121292407-121653902	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:57 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121605800-121644400	Weak transcription	Gastric	stomach
2	chr8:121613200-121668000	Weak transcription	Pancreas	Pancrea
3	chr8:121621800-121644400	Weak transcription	Spleen	Spleen
4	chr8:121623400-121647600	Weak transcription	Fetal Intestine Small	intestine
5	chr8:121625600-121645400	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr8:121628600-121673200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr8:121629400-121645200	Weak transcription	Fetal Stomach	stomach
8	chr8:121633400-121645200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:121633600-121654000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:121635400-121644600	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr8:121637600-121644600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:121637800-121644800	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr8:121638400-121652400	Weak transcription	NHDF-Ad	bronchial
14	chr8:121638400-121653600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr8:121639000-121645600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
16	chr8:121639200-121645000	Strong transcription	Liver	Liver
17	chr8:121639200-121645400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr8:121639400-121649400	Weak transcription	Psoas Muscle	Psoas
19	chr8:121639800-121645600	Strong transcription	Primary T cells from cord blood	blood
20	chr8:121640000-121645400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr8:121640400-121647000	Weak transcription	HUES48 Cell Line	embryonic stem cell
22	chr8:121640600-121644000	Weak transcription	HSMM	muscle
23	chr8:121640600-121645000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
24	chr8:121640600-121645000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr8:121640600-121646000	Strong transcription	Primary monocytes fromperipheralblood	blood
26	chr8:121640600-121646600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
27	chr8:121640600-121648000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
28	chr8:121640600-121654000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr8:121641000-121645000	Strong transcription	Cortex derived primary cultured neurospheres	brain
30	chr8:121641000-121646600	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr8:121641200-121645200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr8:121641400-121647000	Weak transcription	Aorta	Aorta
33	chr8:121642000-121645600	Strong transcription	HepG2	liver
34	chr8:121642200-121645000	Strong transcription	Lung	lung
35	chr8:121642200-121645200	Strong transcription	Primary B cells from cord blood	blood
36	chr8:121642200-121645200	Strong transcription	Primary T helper cells fromperipheralblood	blood
37	chr8:121642200-121645800	Strong transcription	Primary hematopoietic stem cells	blood
38	chr8:121642400-121645000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr8:121642400-121645200	Strong transcription	Primary T cells fromperipheralblood	blood
40	chr8:121642600-121644200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr8:121642600-121645000	Strong transcription	HSMMtube	muscle
42	chr8:121642600-121645200	Strong transcription	Fetal Muscle Trunk	muscle
43	chr8:121642800-121644800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr8:121643000-121644400	Weak transcription	NHLF	lung
45	chr8:121643000-121644600	Strong transcription	Fetal Intestine Large	intestine
46	chr8:121643000-121644800	Strong transcription	Primary neutrophils fromperipheralblood	blood
47	chr8:121643000-121645400	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr8:121643400-121644000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr8:121643400-121644600	Strong transcription	Fetal Muscle Leg	muscle
50	chr8:121643400-121644800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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