Variant report
| Variant | rs4437633 |
|---|---|
| Chromosome Location | chr8:69504822-69504823 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:21)
| rs_ID | r2[population] |
|---|---|
| rs10100961 | 0.80[JPT][hapmap] |
| rs10504428 | 0.87[CEU][hapmap] |
| rs10504429 | 0.87[CEU][hapmap] |
| rs13260066 | 0.88[CEU][hapmap] |
| rs13263606 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs1369231 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs1434939 | 0.89[JPT][hapmap];0.89[ASN][1000 genomes] |
| rs2380482 | 0.88[CEU][hapmap] |
| rs4236963 | 0.88[CEU][hapmap] |
| rs4268113 | 0.87[CEU][hapmap] |
| rs4433132 | 0.88[CEU][hapmap] |
| rs4439109 | 0.85[CEU][hapmap] |
| rs4442130 | 0.88[CEU][hapmap] |
| rs4552886 | 0.88[CEU][hapmap] |
| rs4620274 | 0.82[CEU][hapmap] |
| rs6999118 | 0.88[CEU][hapmap] |
| rs6999432 | 0.87[CEU][hapmap] |
| rs7812930 | 0.88[JPT][hapmap] |
| rs7819024 | 0.88[CEU][hapmap] |
| rs7822850 | 0.88[CEU][hapmap] |
| rs7841285 | 0.88[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv948687 | chr8:69041121-69642540 | Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
| 2 | nsv890981 | chr8:69413110-69534542 | Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
| 3 | nsv890984 | chr8:69482825-69556111 | ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:69503400-69514200 | Weak transcription | Aorta | Aorta |
