The 2.0 version of rSNPBase

Variant report

Variant rs4446932
Chromosome Location chr1:180461197-180461198
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180404400-180469000 Weak transcription Pancreas Pancrea
2 chr1:180428000-180470000 Weak transcription Rectal Smooth Muscle rectum
3 chr1:180431200-180470200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:180432000-180470600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:180434000-180465600 Weak transcription Fetal Brain Male brain
6 chr1:180434200-180470200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:180435200-180469000 Weak transcription Brain Angular Gyrus brain
8 chr1:180437600-180470400 Weak transcription Right Ventricle heart
9 chr1:180437600-180470600 Weak transcription Spleen Spleen
10 chr1:180437600-180471000 Weak transcription Lung lung
11 chr1:180440000-180469000 Weak transcription HSMMtube muscle
12 chr1:180440200-180468400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:180440200-180469000 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:180441800-180462800 Weak transcription NHLF lung
15 chr1:180443400-180468200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:180444800-180470600 Weak transcription Esophagus oesophagus
17 chr1:180447000-180470400 Weak transcription Colonic Mucosa Colon
18 chr1:180447800-180469000 Weak transcription Brain Cingulate Gyrus brain
19 chr1:180448400-180470200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:180449200-180469000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:180449400-180466800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr1:180449800-180465600 Weak transcription Fetal Brain Female brain
23 chr1:180452000-180461400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:180452000-180465200 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr1:180452000-180469000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr1:180452000-180470000 Weak transcription Fetal Heart heart
27 chr1:180452200-180463400 Weak transcription Brain Hippocampus Middle brain
28 chr1:180452200-180467000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:180452400-180464000 Weak transcription Colon Smooth Muscle Colon
30 chr1:180453200-180467400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:180453800-180470600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:180454200-180461800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:180454200-180462200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:180454200-180463600 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr1:180454400-180461600 Strong transcription Fetal Muscle Trunk muscle
36 chr1:180454400-180464800 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr1:180454600-180470600 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:180454800-180468600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:180455000-180468800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:180455200-180466600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:180455400-180470000 Weak transcription Liver Liver
42 chr1:180455600-180462000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr1:180455600-180462400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:180455600-180463000 Weak transcription Fetal Thymus thymus
45 chr1:180455600-180463000 Weak transcription Ovary ovary
46 chr1:180455600-180465400 Weak transcription Duodenum Mucosa Duodenum
47 chr1:180455600-180469000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:180455600-180469000 Weak transcription Psoas Muscle Psoas
49 chr1:180455600-180469000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:180455600-180469400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015