Variant report
Variant | rs4482737 |
---|---|
Chromosome Location | chr4:47322190-47322191 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10003548 | 0.83[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs10025613 | 0.97[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs13116530 | 0.82[YRI][hapmap] |
rs4235144 | 1.00[ASW][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap] |
rs4235145 | 1.00[ASW][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap] |
rs4299555 | 0.86[EUR][1000 genomes] |
rs4389549 | 1.00[YRI][hapmap] |
rs4694844 | 0.86[EUR][1000 genomes] |
rs5025874 | 0.80[YRI][hapmap] |
rs58864642 | 0.86[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv998919 | chr4:47207023-47476876 | Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
2 | nsv879004 | chr4:47234200-47322190 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats | TF binding region | 1 gene(s) | inside rSNPs | diseases |
No data |