Variant report

Variant	rs4542696
Chromosome Location	chr17:46456300-46456301
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:46455689..46457660-chr17:46461525..46464113,2	K562	blood:

rs_ID	r²[population]
rs2938474	0.83[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs4239201	0.82[AFR][1000 genomes]
rs4793816	0.82[AFR][1000 genomes]
rs4794613	0.85[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs58893737	0.81[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs8072002	0.82[AFR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46438400-46471800	Weak transcription	Thymus	Thymus
2	chr17:46450800-46462000	Weak transcription	Primary hematopoietic stem cells	blood
3	chr17:46452200-46463800	Weak transcription	Primary B cells from cord blood	blood
4	chr17:46452400-46459600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr17:46452400-46460200	Weak transcription	GM12878-XiMat	blood
6	chr17:46452400-46463200	Strong transcription	Primary T cells from cord blood	blood
7	chr17:46454400-46459800	Weak transcription	Fetal Thymus	thymus
8	chr17:46454400-46460600	Weak transcription	K562	blood
9	chr17:46454600-46459800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
10	chr17:46454600-46461800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr17:46455400-46456400	Genic enhancers	Primary T cells fromperipheralblood	blood
12	chr17:46455400-46456400	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr17:46455400-46456600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
14	chr17:46455400-46456800	Genic enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr17:46455600-46456400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr17:46455600-46456600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
17	chr17:46455600-46456600	Bivalent Enhancer	Fetal Lung	lung
18	chr17:46455800-46456400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr17:46455800-46457400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr17:46456000-46456400	Genic enhancers	Primary T helper naive cells fromperipheralblood	blood
21	chr17:46456000-46456400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
22	chr17:46456200-46456400	Enhancers	Primary B cells from peripheral blood	blood
23	chr17:46456200-46456400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
24	chr17:46456200-46457400	Weak transcription	Primary T helper cells fromperipheralblood	blood

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