Variant report

Variant	rs4547694
Chromosome Location	chr3:50297330-50297331
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr3:50297220-50297949	GM12878	blood:	n/a	chr3:50297625-50297636
2	RAD21	chr3:50297063-50298115	HCT-116	colon:	n/a	chr3:50297246-50297259 chr3:50297571-50297590 chr3:50297576-50297588 chr3:50297576-50297586 chr3:50297475-50297488 chr3:50297574-50297587
3	CTBP2	chr3:50297099-50298836	H1-hESC	embryonic stem cell:	n/a	n/a
4	POLR2A	chr3:50296981-50298815	MCF-7	breast:	n/a	n/a
5	RFX5	chr3:50297289-50298011	Hela-S3	cervix:	n/a	n/a
6	CREB1	chr3:50297043-50298189	H1-hESC	embryonic stem cell:	n/a	chr3:50297624-50297637
7	POLR2A	chr3:50296614-50299162	HUVEC	blood vessel:	n/a	n/a
8	CTCF	chr3:50296922-50298737	SK-N-SH	brain:	n/a	chr3:50297571-50297587 chr3:50297573-50297582 chr3:50297573-50297586 chr3:50297572-50297593 chr3:50297575-50297585 chr3:50297570-50297588 chr3:50297573-50297586
9	ELF1	chr3:50296828-50298653	GM12878	blood:	n/a	chr3:50297564-50297573 chr3:50297584-50297593 chr3:50297644-50297656
10	ELF1	chr3:50297185-50298042	GM12878	blood:	n/a	chr3:50297564-50297573 chr3:50297584-50297593 chr3:50297644-50297656
11	MAX	chr3:50297217-50298361	ECC-1	luminal epithelium:	n/a	chr3:50297503-50297513
12	EGR1	chr3:50297153-50297920	HCT-116	colon:	n/a	chr3:50297503-50297513 chr3:50297501-50297515 chr3:50297500-50297513 chr3:50297496-50297518 chr3:50297500-50297513
13	MXI1	chr3:50297249-50297700	H1-hESC	embryonic stem cell:	n/a	n/a
14	YY1	chr3:50297246-50297742	GM12878	blood:	n/a	chr3:50297689-50297700 chr3:50297576-50297590 chr3:50297579-50297593 chr3:50297584-50297593 chr3:50297581-50297590 chr3:50297481-50297492 chr3:50297254-50297263
15	MAX	chr3:50297316-50298079	SK-N-SH	brain:	n/a	chr3:50297503-50297513
16	POLR2A	chr3:50296420-50298223	HL-60	blood:	n/a	n/a
17	CHD2	chr3:50297311-50297846	Hela-S3	cervix:	n/a	n/a
18	MAX	chr3:50297179-50297748	NB4	blood:	n/a	chr3:50297503-50297513
19	POLR2A	chr3:50297234-50299038	IMR90	lung:	n/a	n/a
20	MXI1	chr3:50297174-50297724	Hela-S3	cervix:	n/a	n/a
21	ATF2	chr3:50297324-50297831	GM12878	blood:	n/a	chr3:50297625-50297636
22	POLR2A	chr3:50296916-50297996	GM12892	blood:	n/a	n/a
23	NR2F2	chr3:50297301-50297923	MCF-7	breast:	n/a	n/a
24	ESRRA	chr3:50296969-50298229	GM12878	blood:	n/a	chr3:50297704-50297723 chr3:50297702-50297715
25	USF1	chr3:50297146-50297389	H1-hESC	embryonic stem cell:	n/a	n/a
26	RAD21	chr3:50296915-50298290	SK-N-SH	brain:	n/a	chr3:50297246-50297259 chr3:50297571-50297590 chr3:50297576-50297588 chr3:50297576-50297586 chr3:50297475-50297488 chr3:50297574-50297587
27	USF1	chr3:50297173-50297439	H1-hESC	embryonic stem cell:	n/a	n/a
28	ZEB1	chr3:50297109-50297933	GM12878	blood:	n/a	n/a
29	POLR2A	chr3:50297235-50299454	HepG2	liver:	n/a	n/a
30	MYBL2	chr3:50297125-50298525	HepG2	liver:	n/a	n/a
31	ATF2	chr3:50297084-50298469	H1-hESC	embryonic stem cell:	n/a	chr3:50297625-50297636
32	POLR2A	chr3:50296930-50299101	HUVEC	blood vessel:	n/a	n/a
33	POLR2A	chr3:50296776-50297782	GM12891	blood:	n/a	n/a
34	POLR2A	chr3:50296954-50297339	H1-hESC	embryonic stem cell:	n/a	n/a
35	NFIC	chr3:50297311-50297673	GM12878	blood:	n/a	n/a
36	MYC	chr3:50297264-50298064	NB4	blood:	n/a	chr3:50297503-50297513
37	SP1	chr3:50297315-50297884	H1-hESC	embryonic stem cell:	n/a	chr3:50297504-50297516 chr3:50297437-50297446 chr3:50297506-50297515 chr3:50297505-50297514
38	POLR2A	chr3:50296774-50298481	PFSK-1	brain:	n/a	n/a
39	POLR2A	chr3:50297011-50298710	H1-neurons	neurons:	n/a	n/a
40	HMGN3	chr3:50297307-50298084	K562	blood:	n/a	n/a
41	MAZ	chr3:50297254-50297797	GM12878	blood:	n/a	chr3:50297503-50297513
42	BCL3	chr3:50297289-50298042	GM12878	blood:	n/a	chr3:50297575-50297588 chr3:50297583-50297592 chr3:50297564-50297577
43	SMC3	chr3:50296933-50298727	SK-N-SH	brain:	n/a	chr3:50297572-50297586 chr3:50297576-50297586
44	POLR2A	chr3:50296927-50299142	Hela-S3	cervix:	n/a	n/a
45	POLR2A	chr3:50297251-50298633	H1-hESC	embryonic stem cell:	n/a	n/a
46	HEY1	chr3:50297294-50299189	HepG2	liver:	n/a	chr3:50297625-50297634 chr3:50297627-50297636 chr3:50297580-50297595 chr3:50297688-50297703
47	MAZ	chr3:50297272-50298148	HepG2	liver:	n/a	chr3:50297503-50297513
48	RAD21	chr3:50297326-50297809	HepG2	liver:	n/a	chr3:50297571-50297590 chr3:50297576-50297588 chr3:50297576-50297586 chr3:50297475-50297488 chr3:50297574-50297587
49	CTCF	chr3:50297310-50297790	H1-hESC	embryonic stem cell:	n/a	chr3:50297571-50297587 chr3:50297573-50297582 chr3:50297573-50297586 chr3:50297572-50297593 chr3:50297575-50297585 chr3:50297570-50297588 chr3:50297573-50297586
50	POLR2A	chr3:50296763-50298608	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:50262911..50267533-chr3:50295894..50298944,5	MCF-7	breast:
2	chr3:50295925..50299690-chr3:50335868..50338319,4	K562	blood:
3	chr3:50296610..50299539-chr3:50310066..50312117,3	K562	blood:
4	chr3:50296091..50300659-chr3:50356103..50362246,11	MCF-7	breast:
5	chr12:120729020..120729933-chr3:50297287..50297971,2	Hela-S3	cervix:
6	chr3:50266710..50270196-chr3:50295064..50299749,5	K562	blood:
7	chr3:50229933..50231783-chr3:50296964..50298649,2	K562	blood:
8	chr3:50297136..50298055-chr3:50311497..50312548,4	MCF-7	breast:
9	chr3:50295514..50297815-chr3:50364453..50367388,3	K562	blood:
10	chr3:50295829..50297703-chr3:50298503..50300987,2	K562	blood:
11	chr3:50294811..50297439-chr3:50365376..50367320,3	MCF-7	breast:
12	chr3:50296030..50318456-chr3:50318822..50339499,66	MCF-7	breast:
13	chr3:50272666..50274549-chr3:50296154..50297736,2	K562	blood:
14	chr3:50283458..50285462-chr3:50296982..50299198,2	K562	blood:
15	chr3:50275833..50279919-chr3:50292841..50298987,5	MCF-7	breast:
16	chr3:50295790..50299500-chr3:50356173..50362991,11	MCF-7	breast:
17	chr3:50264047..50265406-chr3:50297136..50298172,6	K562	blood:
18	chr3:50294632..50297362-chr3:50310671..50313521,2	K562	blood:
19	chr3:50297097..50298047-chr3:50310088..50310992,4	MCF-7	breast:
20	chr3:50295514..50298140-chr3:50364453..50366919,2	K562	blood:
21	chr3:50263539..50265504-chr3:50297287..50299531,3	K562	blood:
22	chr3:50297106..50297991-chr3:50310311..50310997,3	K562	blood:
23	chr3:50272452..50275619-chr3:50295837..50299163,4	MCF-7	breast:
24	chr3:50263231..50266292-chr3:50296213..50298678,3	MCF-7	breast:
25	chr3:50290143..50293966-chr3:50294360..50298503,5	K562	blood:
26	chr3:50291997..50295519-chr3:50296180..50299303,4	MCF-7	breast:
27	chr3:50272477..50276068-chr3:50288828..50297512,10	MCF-7	breast:
28	chr3:50292125..50293966-chr3:50295138..50298503,4	K562	blood:

Variant related genes	Relation type
ENSG00000230454	TF binding region
ENSG00000114349	Chromatin interaction
ENSG00000213600	Chromatin interaction
ENSG00000243477	Chromatin interaction
ENSG00000202538	Chromatin interaction
ENSG00000012171	Chromatin interaction
ENSG00000114383	Chromatin interaction
ENSG00000114353	Chromatin interaction
ENSG00000068001	Chromatin interaction
ENSG00000214706	Chromatin interaction
ENSG00000230454	Chromatin interaction
ENSG00000186792	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 10 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1076872	0.82[ASW][hapmap];0.91[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.80[TSI][hapmap];0.83[ASN][1000 genomes]
rs11715758	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11917680	0.94[CHD][hapmap]
rs2282755	0.94[CHD][hapmap]
rs709210	0.82[ASW][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.94[MEX][hapmap]
rs9877046	0.82[ASW][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:28 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001775	chr3:50129479-50311666	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv523662	chr3:50144951-50584999	Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
3	nsv1013949	chr3:50151712-50339163	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
4	nsv590250	chr3:50153356-50332697	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
5	nsv876769	chr3:50155468-50408398	Active TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	94 gene(s)	inside rSNPs	diseases
6	esv1821728	chr3:50156142-50657253	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
7	esv1793751	chr3:50157364-50476363	Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
8	esv1828162	chr3:50157364-50506151	Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
9	nsv590251	chr3:50158774-50337422	Active TSS Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
10	nsv470561	chr3:50158774-50584999	Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
11	nsv876770	chr3:50158774-50609624	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	103 gene(s)	inside rSNPs	diseases
12	nsv523560	chr3:50172397-50339163	Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
13	nsv460529	chr3:50178011-50324672	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
14	nsv460530	chr3:50178011-50324672	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
15	nsv590252	chr3:50178011-50324672	Enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
16	nsv1002916	chr3:50187646-50311666	Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
17	nsv536564	chr3:50187646-50311666	Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
18	nsv1014256	chr3:50187646-50339163	Enhancers Active TSS Strong transcription Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
19	nsv536565	chr3:50187646-50339163	Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
20	nsv1001993	chr3:50187646-50640808	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
21	nsv590253	chr3:50196418-50337422	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
22	esv2757870	chr3:50198478-50371377	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
23	esv2759148	chr3:50198478-50371377	Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
24	nsv834692	chr3:50198485-50393464	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	94 gene(s)	inside rSNPs	diseases
25	nsv590254	chr3:50243510-50388607	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
26	nsv460531	chr3:50247824-50436827	Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
27	nsv590255	chr3:50247824-50436827	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
28	nsv876772	chr3:50255305-50436827	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases

mRNA abundance (count:10)

SNP	Gene	Cis/trans	Tissue	Source
rs4547694	CCDC71	cis	parietal	SCAN
rs4547694	HYAL3	cis	Esophagus Muscularis	GTEx
rs4547694	PER3	trans	lymphoblastoid	seeQTL
rs4547694	PTH1R	cis	parietal	SCAN
rs4547694	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs4547694	HYAL3	cis	Heart Left Ventricle	GTEx
rs4547694	RBM6	cis	cerebellum	SCAN
rs4547694	RNF123	cis	parietal	SCAN
rs4547694	HYAL3,NAT6	cis	brain	BrainEAC
rs4547694	SEMA3G	cis	parietal	SCAN

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50284800-50300600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr3:50289000-50297600	Genic enhancers	HUVEC	blood vessel
3	chr3:50294400-50297400	Genic enhancers	Cortex derived primary cultured neurospheres	brain
4	chr3:50294400-50297600	Genic enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr3:50295600-50297400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr3:50295600-50297400	Genic enhancers	Fetal Thymus	thymus
7	chr3:50295800-50297600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr3:50295800-50298600	Weak transcription	Fetal Kidney	kidney
9	chr3:50295800-50298600	Genic enhancers	Spleen	Spleen
10	chr3:50296000-50297600	Weak transcription	Aorta	Aorta
11	chr3:50296000-50297600	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr3:50296200-50297600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr3:50296200-50297800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr3:50296200-50297800	Weak transcription	Fetal Lung	lung
15	chr3:50296400-50297400	Enhancers	Esophagus	oesophagus
16	chr3:50296400-50297600	Genic enhancers	Fetal Intestine Small	intestine
17	chr3:50296400-50298000	Weak transcription	Gastric	stomach
18	chr3:50296600-50297400	Genic enhancers	NHEK	skin
19	chr3:50296600-50297600	Enhancers	H1 Cell Line	embryonic stem cell
20	chr3:50296600-50297600	Enhancers	HMEC	breast
21	chr3:50296600-50297800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr3:50296600-50297800	Enhancers	Brain Angular Gyrus	brain
23	chr3:50296800-50297400	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chr3:50296800-50297400	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr3:50296800-50297400	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
26	chr3:50296800-50297600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr3:50296800-50297600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr3:50296800-50297600	Genic enhancers	Primary neutrophils fromperipheralblood	blood
29	chr3:50296800-50297600	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
30	chr3:50296800-50297600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr3:50296800-50297600	Enhancers	Liver	Liver
32	chr3:50296800-50297600	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr3:50296800-50297600	Genic enhancers	Fetal Stomach	stomach
34	chr3:50296800-50297600	Enhancers	Pancreas	Pancrea
35	chr3:50296800-50297600	Enhancers	HSMMtube	muscle
36	chr3:50296800-50297800	Enhancers	Primary B cells from peripheral blood	blood
37	chr3:50296800-50297800	Enhancers	NHDF-Ad	bronchial
38	chr3:50296800-50299000	Enhancers	Stomach Mucosa	stomach
39	chr3:50297000-50297400	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr3:50297000-50297400	Genic enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr3:50297000-50297400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr3:50297000-50297400	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr3:50297000-50297400	Flanking Active TSS	Brain Hippocampus Middle	brain
44	chr3:50297000-50297400	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr3:50297000-50297400	Flanking Active TSS	Colon Smooth Muscle	Colon
46	chr3:50297000-50297400	Enhancers	Right Ventricle	heart
47	chr3:50297000-50297400	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
48	chr3:50297000-50297400	Flanking Active TSS	HepG2	liver
49	chr3:50297000-50297600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr3:50297000-50297600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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