Variant report

Variant	rs4549786
Chromosome Location	chr13:79877388-79877389
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10113543	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13262497	0.88[AMR][1000 genomes]
rs1458566	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1496301	0.88[AMR][1000 genomes]
rs1496306	0.84[AMR][1000 genomes]
rs1563690	0.92[ASN][1000 genomes]
rs1632267	0.84[ASN][1000 genomes]
rs1674242	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1674243	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1674244	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2926089	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2926092	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2926100	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2926101	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2926102	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2926103	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2926104	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2956826	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2956829	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2956839	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960472	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960473	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960474	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960475	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2960481	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2960482	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960483	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2960484	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960485	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2960486	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6472554	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6999993	0.86[AMR][1000 genomes]
rs7015900	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7821296	0.88[AMR][1000 genomes]
rs7822184	0.84[AMR][1000 genomes]
rs7828606	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7838995	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79865000-79893200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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