Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12869557	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12873785	0.95[ASN][1000 genomes]
rs1555722	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1974039	0.95[ASN][1000 genomes]
rs2104373	0.99[ASN][1000 genomes]
rs2104374	0.98[ASN][1000 genomes]
rs4942710	0.99[ASN][1000 genomes]
rs6561411	0.91[ASN][1000 genomes]
rs7317860	0.91[ASN][1000 genomes]
rs7323277	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7334095	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7334463	0.91[ASN][1000 genomes]
rs7336952	0.91[ASN][1000 genomes]
rs7337766	0.91[ASN][1000 genomes]
rs7981260	0.93[ASN][1000 genomes]
rs7986369	0.96[ASN][1000 genomes]
rs7993360	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7993810	0.96[ASN][1000 genomes]
rs7994427	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7998886	0.95[ASN][1000 genomes]
rs9562779	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9567940	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9567943	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9567948	0.89[ASN][1000 genomes]
rs9591123	0.86[EUR][1000 genomes]
rs9595813	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3510679	chr13:48236624-48498185	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3510680	chr13:48236624-48498185	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv933980	chr13:48431000-48557419	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:48444200-48448000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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