Variant report

Variant rs45559532
Chromosome Location chr2:171694064-171694065
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171683600-171694200 Genic enhancers Cortex derived primary cultured neurospheres brain
2 chr2:171685800-171699000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr2:171686400-171699200 Strong transcription HUES6 Cell Line embryonic stem cell
4 chr2:171687800-171712600 Weak transcription Brain Anterior Caudate brain
5 chr2:171688800-171719000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr2:171689400-171694400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr2:171689800-171696200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr2:171689800-171705400 Weak transcription Aorta Aorta
9 chr2:171690000-171715000 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr2:171690200-171698800 Weak transcription NHEK skin
11 chr2:171690600-171700400 Weak transcription Hela-S3 cervix
12 chr2:171692200-171696800 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr2:171692600-171694800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr2:171693000-171697400 Weak transcription K562 blood
15 chr2:171693400-171694600 Strong transcription Brain Germinal Matrix brain
16 chr2:171693800-171698800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr2:171693800-171706400 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr2:171694000-171694600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:171694000-171695400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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