Variant report
Variant | rs455739 |
---|---|
Chromosome Location | chr3:161089460-161089461 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:161088000-161091400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
2 | chr3:161088400-161089800 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
3 | chr3:161088400-161091000 | Active TSS | H9 Cell Line | embryonic stem cell |
4 | chr3:161088600-161090600 | Active TSS | H1 Cell Line | embryonic stem cell |
5 | chr3:161088600-161090600 | Bivalent/Poised TSS | iPS-20b Cell Line | embryonic stem cell |
6 | chr3:161088600-161090800 | Active TSS | Stomach Mucosa | stomach |
7 | chr3:161089000-161089600 | Flanking Active TSS | Fetal Brain Female | brain |
8 | chr3:161089000-161090200 | Active TSS | HUES48 Cell Line | embryonic stem cell |
9 | chr3:161089000-161090400 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
10 | chr3:161089000-161090600 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
11 | chr3:161089000-161090600 | Active TSS | Brain Anterior Caudate | brain |
12 | chr3:161089000-161090600 | Active TSS | Brain Inferior Temporal Lobe | brain |
13 | chr3:161089000-161090600 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
14 | chr3:161089000-161090800 | Active TSS | Brain Germinal Matrix | brain |
15 | chr3:161089000-161091000 | Bivalent/Poised TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
16 | chr3:161089000-161091000 | Active TSS | Brain Cingulate Gyrus | brain |
17 | chr3:161089200-161089600 | Bivalent Enhancer | H1 Derived Mesenchymal Stem Cells | ES cell derived |
18 | chr3:161089200-161089600 | Flanking Bivalent TSS/Enh | H9 Derived Neuron Cultured Cells | ES cell derived |
19 | chr3:161089200-161089600 | Bivalent/Poised TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
20 | chr3:161089200-161089600 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
21 | chr3:161089200-161089600 | Flanking Active TSS | Primary T helper naive cells from peripheral blood | blood |
22 | chr3:161089200-161089600 | Flanking Bivalent TSS/Enh | Muscle Satellite Cultured Cells | -- |
23 | chr3:161089200-161089600 | Flanking Active TSS | Brain Substantia Nigra | brain |
24 | chr3:161089200-161089600 | Bivalent/Poised TSS | Duodenum Mucosa | Duodenum |
25 | chr3:161089200-161089600 | Flanking Active TSS | Fetal Brain Male | brain |
26 | chr3:161089200-161089600 | Bivalent Enhancer | Fetal Heart | heart |
27 | chr3:161089200-161089600 | Flanking Bivalent TSS/Enh | Fetal Stomach | stomach |
28 | chr3:161089200-161089600 | Active TSS | Placenta Amnion | Placenta Amnion |
29 | chr3:161089200-161089600 | Bivalent Enhancer | HSMM | muscle |
30 | chr3:161089200-161089800 | Bivalent Enhancer | Primary B cells from cord blood | blood |
31 | chr3:161089200-161089800 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
32 | chr3:161089200-161089800 | Flanking Bivalent TSS/Enh | Primary T killer naive cells fromperipheralblood | blood |
33 | chr3:161089200-161089800 | Flanking Bivalent TSS/Enh | Foreskin Fibroblast Primary Cells skin02 | Skin |
34 | chr3:161089200-161089800 | Flanking Active TSS | Brain Hippocampus Middle | brain |
35 | chr3:161089200-161089800 | Flanking Active TSS | Right Atrium | heart |
36 | chr3:161089200-161090000 | Bivalent Enhancer | Primary B cells from peripheral blood | blood |
37 | chr3:161089200-161090000 | Bivalent/Poised TSS | Psoas Muscle | Psoas |
38 | chr3:161089200-161090000 | Bivalent/Poised TSS | HepG2 | liver |
39 | chr3:161089200-161090200 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
40 | chr3:161089200-161090200 | Bivalent/Poised TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
41 | chr3:161089200-161090200 | Flanking Bivalent TSS/Enh | Primary T helper cells PMA-I stimulated | -- |
42 | chr3:161089200-161090200 | Flanking Bivalent TSS/Enh | Primary T helper 17 cells PMA-I stimulated | -- |
43 | chr3:161089200-161090200 | Flanking Bivalent TSS/Enh | Primary T regulatory cells fromperipheralblood | blood |
44 | chr3:161089200-161090200 | Flanking Bivalent TSS/Enh | Rectal Mucosa Donor 29 | rectum |
45 | chr3:161089200-161090400 | Active TSS | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
46 | chr3:161089200-161090400 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
47 | chr3:161089200-161090400 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
48 | chr3:161089200-161090600 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
49 | chr3:161089200-161090600 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
50 | chr3:161089200-161090600 | Bivalent/Poised TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |