Variant report

Variant	rs45606334
Chromosome Location	chr6:133045119-133045120
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs45518231	1.00[ASN][1000 genomes]
rs6916256	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532069	chr6:132776411-133462292	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv1015742	chr6:132933666-133285852	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	71 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133034800-133053200	Weak transcription	Placenta	Placenta
2	chr6:133038000-133053400	Weak transcription	Primary hematopoietic stem cells	blood
3	chr6:133041800-133048400	Strong transcription	Primary neutrophils fromperipheralblood	blood
4	chr6:133042600-133045800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr6:133043000-133045600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:133043000-133047800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr6:133043200-133046000	Strong transcription	Primary monocytes fromperipheralblood	blood
8	chr6:133043200-133050000	Strong transcription	Liver	Liver
9	chr6:133043200-133051200	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr6:133043600-133051600	Weak transcription	HepG2	liver
11	chr6:133044400-133052000	Weak transcription	Primary B cells from cord blood	blood
12	chr6:133044400-133066200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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