Variant report

Variant rs45621438
Chromosome Location chr21:45790238-45790239
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45771200-45795800 Weak transcription Brain Angular Gyrus brain
2 chr21:45776600-45794600 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr21:45780200-45793600 Weak transcription Primary T cells from cord blood blood
4 chr21:45780400-45795000 Weak transcription Thymus Thymus
5 chr21:45783200-45792600 Strong transcription Primary monocytes fromperipheralblood blood
6 chr21:45783600-45794400 Weak transcription Primary B cells from peripheral blood blood
7 chr21:45783800-45794600 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr21:45784200-45793800 Weak transcription Primary B cells from cord blood blood
9 chr21:45784400-45795600 Weak transcription Right Atrium heart
10 chr21:45788200-45793200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr21:45788800-45790400 Genic enhancers Primary neutrophils fromperipheralblood blood
12 chr21:45788800-45790400 Enhancers Esophagus oesophagus
13 chr21:45788800-45790600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
14 chr21:45788800-45790600 Bivalent Enhancer Fetal Muscle Trunk muscle
15 chr21:45788800-45791000 Enhancers Pancreas Pancrea
16 chr21:45788800-45791200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr21:45789200-45790400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr21:45789200-45790600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
19 chr21:45789200-45790600 Enhancers Liver Liver
20 chr21:45789400-45790400 Weak transcription Spleen Spleen
21 chr21:45789400-45790600 Enhancers HMEC breast
22 chr21:45789400-45790800 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
23 chr21:45789800-45790400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
24 chr21:45789800-45790400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr21:45789800-45790400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr21:45789800-45790400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
27 chr21:45789800-45790400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
28 chr21:45789800-45790400 Bivalent Enhancer Fetal Stomach stomach
29 chr21:45789800-45790400 Bivalent Enhancer K562 blood
30 chr21:45789800-45790600 Bivalent Enhancer Colonic Mucosa Colon
31 chr21:45789800-45790800 Flanking Active TSS HepG2 liver
32 chr21:45790000-45790400 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
33 chr21:45790000-45790400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr21:45790000-45790400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr21:45790000-45790400 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
36 chr21:45790000-45790400 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr21:45790000-45790400 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
38 chr21:45790000-45790400 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
39 chr21:45790000-45790400 Active TSS Pancreatic Islets Pancreatic Islet
40 chr21:45790000-45790400 Bivalent Enhancer Rectal Mucosa Donor 31 rectum
41 chr21:45790000-45790400 Active TSS Right Ventricle heart
42 chr21:45790000-45790400 Flanking Active TSS Hela-S3 cervix
43 chr21:45790000-45790400 Enhancers HSMM muscle
44 chr21:45790000-45790400 Active TSS Monocytes-CD14+_RO01746 blood
45 chr21:45790000-45790600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
46 chr21:45790000-45790600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr21:45790000-45790600 Bivalent Enhancer Brain Dorsolateral Prefrontal Cortex brain
48 chr21:45790000-45790600 Flanking Active TSS Ovary ovary
49 chr21:45790000-45790600 Bivalent Enhancer Placenta Amnion Placenta Amnion
50 chr21:45790000-45790800 Bivalent Enhancer Fetal Intestine Large intestine

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