Variant report

Variant rs4562250
Chromosome Location chr7:111199017-111199018
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111162200-111200800 Weak transcription Brain Anterior Caudate brain
2 chr7:111168000-111201200 Weak transcription Left Ventricle heart
3 chr7:111168400-111200400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr7:111168800-111199600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr7:111170200-111200800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr7:111170200-111201600 Weak transcription Esophagus oesophagus
7 chr7:111173600-111200600 Weak transcription Colon Smooth Muscle Colon
8 chr7:111174000-111201200 Weak transcription Right Ventricle heart
9 chr7:111176200-111201400 Weak transcription Primary monocytes fromperipheralblood blood
10 chr7:111178400-111201600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr7:111180600-111200800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr7:111181000-111200600 Weak transcription Psoas Muscle Psoas
13 chr7:111181200-111200600 Weak transcription Duodenum Mucosa Duodenum
14 chr7:111183800-111201600 Weak transcription Lung lung
15 chr7:111184800-111200600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr7:111184800-111200800 Weak transcription Small Intestine intestine
17 chr7:111185600-111201600 Weak transcription Spleen Spleen
18 chr7:111185800-111201400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr7:111186000-111200600 Weak transcription Brain Hippocampus Middle brain
20 chr7:111186400-111199600 Weak transcription Fetal Stomach stomach
21 chr7:111186400-111199800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr7:111186400-111200800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr7:111186800-111201000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr7:111187400-111200800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr7:111187600-111200800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr7:111187600-111201600 Weak transcription Gastric stomach
27 chr7:111187800-111200800 Weak transcription Rectal Smooth Muscle rectum
28 chr7:111188000-111199400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:111188000-111199800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr7:111188200-111200800 Weak transcription Brain Cingulate Gyrus brain
31 chr7:111188200-111201000 Weak transcription Brain Substantia Nigra brain
32 chr7:111188400-111200600 Weak transcription H9 Cell Line embryonic stem cell
33 chr7:111188400-111201200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr7:111188600-111200400 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr7:111188800-111201000 Weak transcription NH-A brain
36 chr7:111189000-111200800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr7:111189000-111201000 Weak transcription HSMM muscle
38 chr7:111189000-111201600 Weak transcription Fetal Brain Male brain
39 chr7:111189200-111199800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr7:111189400-111201000 Weak transcription Brain Angular Gyrus brain
41 chr7:111189400-111201000 Weak transcription NHDF-Ad bronchial
42 chr7:111189400-111201600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr7:111189600-111199400 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr7:111189800-111200600 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr7:111189800-111200800 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr7:111191000-111200800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr7:111191000-111201600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr7:111191200-111201400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr7:111191400-111201600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr7:111191600-111200200 Weak transcription HepG2 liver

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