Variant report
| Variant | rs4565740 |
|---|---|
| Chromosome Location | chr1:59339353-59339354 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:59319800-59361400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr1:59334200-59340400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr1:59335200-59341800 | Enhancers | K562 | blood |
| 4 | chr1:59336200-59339800 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr1:59336200-59341000 | Weak transcription | Fetal Kidney | kidney |
| 6 | chr1:59336400-59339600 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr1:59336400-59340200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr1:59336400-59340200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 9 | chr1:59336600-59340000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr1:59336600-59340200 | Weak transcription | Fetal Thymus | thymus |
| 11 | chr1:59338200-59342000 | Enhancers | Stomach Mucosa | stomach |
| 12 | chr1:59338400-59340200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 13 | chr1:59338800-59339400 | Enhancers | Gastric | stomach |
| 14 | chr1:59338800-59339600 | Enhancers | Lung | lung |
| 15 | chr1:59338800-59339600 | Enhancers | Pancreas | Pancrea |
| 16 | chr1:59338800-59340000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 17 | chr1:59338800-59340800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 18 | chr1:59338800-59341400 | Enhancers | Right Ventricle | heart |
| 19 | chr1:59338800-59341600 | Enhancers | Fetal Heart | heart |
| 20 | chr1:59339000-59339400 | Bivalent Enhancer | HepG2 | liver |
| 21 | chr1:59339000-59339600 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr1:59339000-59339600 | Weak transcription | Brain Substantia Nigra | brain |
| 23 | chr1:59339000-59339600 | Enhancers | Esophagus | oesophagus |
| 24 | chr1:59339000-59339600 | Enhancers | Left Ventricle | heart |
| 25 | chr1:59339000-59339600 | Enhancers | HUVEC | blood vessel |
| 26 | chr1:59339000-59340200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 27 | chr1:59339000-59341400 | Enhancers | Placenta Amnion | Placenta Amnion |
| 28 | chr1:59339000-59341400 | Enhancers | Right Atrium | heart |
| 29 | chr1:59339000-59341600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr1:59339000-59341800 | Enhancers | Fetal Intestine Large | intestine |
| 31 | chr1:59339000-59342000 | Enhancers | Fetal Intestine Small | intestine |
| 32 | chr1:59339200-59339400 | Enhancers | Psoas Muscle | Psoas |
| 33 | chr1:59339200-59339400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 34 | chr1:59339200-59339600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 35 | chr1:59339200-59339800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 36 | chr1:59339200-59340000 | Weak transcription | Fetal Muscle Leg | muscle |
| 37 | chr1:59339200-59340200 | Enhancers | Brain Hippocampus Middle | brain |
| 38 | chr1:59339200-59340200 | Enhancers | Duodenum Mucosa | Duodenum |
| 39 | chr1:59339200-59340200 | Weak transcription | Placenta | Placenta |
| 40 | chr1:59339200-59340200 | Enhancers | Stomach Smooth Muscle | stomach |
| 41 | chr1:59339200-59341400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 42 | chr1:59339200-59341800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 43 | chr1:59339200-59341800 | Enhancers | Brain Cingulate Gyrus | brain |
| 44 | chr1:59339200-59341800 | Enhancers | Fetal Lung | lung |
