Variant report

Variant rs4579987
Chromosome Location chr12:8542916-8542917
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8542000-8543200 Active TSS iPS-15b Cell Line embryonic stem cell
2 chr12:8542000-8543200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
3 chr12:8542200-8543000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
4 chr12:8542200-8543000 Enhancers Spleen Spleen
5 chr12:8542200-8543200 Active TSS H9 Cell Line embryonic stem cell
6 chr12:8542200-8543200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
7 chr12:8542200-8543200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
8 chr12:8542200-8548600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr12:8542400-8543200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
10 chr12:8542400-8543200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr12:8542400-8543200 Active TSS Pancreatic Islets Pancreatic Islet
12 chr12:8542400-8543400 Active TSS Primary neutrophils fromperipheralblood blood
13 chr12:8542600-8543000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr12:8542600-8543000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
15 chr12:8542600-8543000 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
16 chr12:8542600-8543000 Flanking Bivalent TSS/Enh Primary Natural Killer cells fromperipheralblood blood
17 chr12:8542600-8543000 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
18 chr12:8542600-8543000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
19 chr12:8542600-8543000 Bivalent/Poised TSS Brain Hippocampus Middle brain
20 chr12:8542600-8543000 Enhancers Fetal Brain Male brain
21 chr12:8542600-8543000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
22 chr12:8542600-8543000 Bivalent/Poised TSS Placenta Amnion Placenta Amnion
23 chr12:8542600-8543000 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
24 chr12:8542600-8543000 Active TSS HUVEC blood vessel
25 chr12:8542600-8543200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
26 chr12:8542600-8543200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr12:8542600-8543200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr12:8542600-8543200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr12:8542600-8543200 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr12:8542600-8543200 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
31 chr12:8542600-8543200 Active TSS Primary T helper cells PMA-I stimulated --
32 chr12:8542600-8543200 Active TSS Primary T helper cells fromperipheralblood blood
33 chr12:8542600-8543200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:8542600-8543200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr12:8542600-8543200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr12:8542600-8543200 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr12:8542600-8543200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:8542600-8543200 Active TSS Primary mononuclear cells fromperipheralblood Blood
39 chr12:8542600-8543200 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
40 chr12:8542600-8543200 Enhancers Liver Liver
41 chr12:8542600-8543200 Active TSS Brain Anterior Caudate brain
42 chr12:8542600-8543200 Active TSS Brain Cingulate Gyrus brain
43 chr12:8542600-8543200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
44 chr12:8542600-8543200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
45 chr12:8542600-8543200 Active TSS Fetal Brain Female brain
46 chr12:8542600-8543200 Bivalent/Poised TSS Fetal Intestine Small intestine
47 chr12:8542600-8543200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
48 chr12:8542600-8543200 Bivalent/Poised TSS Fetal Stomach stomach
49 chr12:8542600-8543200 Active TSS Ovary ovary
50 chr12:8542600-8543200 Active TSS Pancreas Pancrea

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