The 2.0 version of rSNPBase

Variant report

Variant rs458661
Chromosome Location chr5:75943453-75943454
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:75882600-75969400 Weak transcription Stomach Mucosa stomach
2 chr5:75903800-75943600 Weak transcription Spleen Spleen
3 chr5:75914200-75953800 Weak transcription Colonic Mucosa Colon
4 chr5:75918200-75943600 Weak transcription Rectal Smooth Muscle rectum
5 chr5:75919200-75943600 Weak transcription Fetal Intestine Large intestine
6 chr5:75919200-75955400 Weak transcription Fetal Kidney kidney
7 chr5:75919400-75944200 Weak transcription Fetal Lung lung
8 chr5:75923000-75944400 Strong transcription Primary T cells fromperipheralblood blood
9 chr5:75924200-75943600 Weak transcription Ovary ovary
10 chr5:75926200-75943800 Strong transcription Primary T cells from cord blood blood
11 chr5:75929400-75943800 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr5:75929800-75943800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
13 chr5:75929800-75945400 Weak transcription H1 Cell Line embryonic stem cell
14 chr5:75930400-75944400 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr5:75931400-75943800 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr5:75931600-75943600 Weak transcription Lung lung
17 chr5:75932200-75945400 Weak transcription H9 Cell Line embryonic stem cell
18 chr5:75934400-75945000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr5:75934800-75943600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr5:75934800-75944600 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr5:75935000-75943600 Weak transcription Primary B cells from peripheral blood blood
22 chr5:75935000-75943600 Strong transcription Primary hematopoietic stem cells blood
23 chr5:75935000-75943600 Strong transcription Liver Liver
24 chr5:75935000-75943600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr5:75935000-75943600 Weak transcription Small Intestine intestine
26 chr5:75935000-75945000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr5:75935000-75945400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr5:75935200-75945000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr5:75935400-75943600 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr5:75936200-75944000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr5:75937000-75944200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr5:75937200-75943600 Weak transcription Fetal Stomach stomach
33 chr5:75938400-75943600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr5:75938600-75943600 Weak transcription GM12878-XiMat blood
35 chr5:75938800-75943600 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr5:75938800-75943600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr5:75938800-75943600 Weak transcription Gastric stomach
38 chr5:75938800-75943600 Weak transcription Osteobl bone
39 chr5:75938800-75944000 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr5:75938800-75945400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr5:75939000-75943600 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr5:75939200-75943600 Weak transcription Fetal Thymus thymus
43 chr5:75939400-75943600 Weak transcription HepG2 liver
44 chr5:75939400-75944200 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr5:75939600-75943600 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr5:75940000-75943600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr5:75941400-75943600 Strong transcription Primary neutrophils fromperipheralblood blood
48 chr5:75942000-75943600 Weak transcription Primary B cells from cord blood blood
49 chr5:75942200-75943600 Weak transcription Duodenum Mucosa Duodenum
50 chr5:75942800-75943600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015