Variant report

Variant	rs462507
Chromosome Location	chr21:40008668-40008669
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs456457	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs459094	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs460214	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs462588	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40003800-40014400	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr21:40004200-40008800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr21:40008200-40008800	Enhancers	Aorta	Aorta
4	chr21:40008200-40010000	Enhancers	HMEC	breast
5	chr21:40008400-40009400	Enhancers	Fetal Lung	lung
6	chr21:40008400-40010000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr21:40008400-40010400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr21:40008600-40008800	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
9	chr21:40008600-40008800	Enhancers	Esophagus	oesophagus
10	chr21:40008600-40009000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr21:40008600-40009200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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