Variant report

Variant	rs4630147
Chromosome Location	chr1:84188357-84188358
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10157075	0.89[EUR][1000 genomes]
rs10159385	0.90[EUR][1000 genomes]
rs12724410	0.90[EUR][1000 genomes]
rs12740437	0.90[EUR][1000 genomes]
rs12751121	0.90[EUR][1000 genomes]
rs12759883	0.90[EUR][1000 genomes]
rs17577039	0.90[EUR][1000 genomes]
rs6664562	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6683294	0.88[EUR][1000 genomes]
rs6683329	0.81[ASN][1000 genomes]
rs6683621	0.88[EUR][1000 genomes]
rs6691243	0.81[ASN][1000 genomes]
rs742777	0.88[EUR][1000 genomes]
rs9787087	0.90[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4630147	SH3GLB1	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84182800-84205800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:84184400-84191600	Weak transcription	Fetal Thymus	thymus
3	chr1:84188000-84191800	Weak transcription	Aorta	Aorta
4	chr1:84188200-84189200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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