Variant report

Variant	rs4635277
Chromosome Location	chr14:105488267-105488268
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr14:105486591-105488518	GM19099	blood:	n/a	n/a
2	MXI1	chr14:105487234-105488446	Hela-S3	cervix:	n/a	chr14:105487771-105487780 chr14:105487769-105487778
3	CTCF	chr14:105488180-105488330	GM12868	blood:	n/a	n/a
4	CTCF	chr14:105488169-105488279	Pancreas_OC	pancreas:	n/a	n/a
5	CTCF	chr14:105488120-105488270	HCPEpiC	choroid plexus:	n/a	n/a
6	RELA	chr14:105486648-105488390	GM15510	blood:	n/a	chr14:105486805-105486814 chr14:105486805-105486814
7	POLR2A	chr14:105488020-105488431	GM12878	blood:	n/a	n/a
8	CTCF	chr14:105488140-105488290	GM12869	blood:	n/a	n/a
9	POLR2A	chr14:105487177-105488389	HCT-116	colon:	n/a	n/a
10	POLR2A	chr14:105486608-105488458	A549	lung:	n/a	n/a
11	POLR2A	chr14:105487165-105488608	MCF10A-Er-Src	breast:	n/a	n/a
12	POLR2A	chr14:105486771-105488361	GM10847	blood:	n/a	n/a
13	CTCF	chr14:105488120-105488270	HMEC	breast:	n/a	n/a
14	CTCF	chr14:105488081-105488400	GM12878	blood:	n/a	n/a
15	CTCF	chr14:105488180-105488330	HCFaa	heart:	n/a	n/a
16	USF2	chr14:105487402-105488357	GM12878	blood:	n/a	chr14:105488088-105488104
17	MAZ	chr14:105486565-105488339	GM12878	blood:	n/a	chr14:105487772-105487781 chr14:105487761-105487777 chr14:105488011-105488018 chr14:105487769-105487779 chr14:105488235-105488244 chr14:105487768-105487777 chr14:105487029-105487038 chr14:105488007-105488020
18	YY1	chr14:105487720-105488397	A549	lung:	n/a	chr14:105487756-105487770
19	E2F6	chr14:105487226-105488510	H1-hESC	embryonic stem cell:	n/a	chr14:105487754-105487763 chr14:105487505-105487514 chr14:105487576-105487588 chr14:105487525-105487534 chr14:105487553-105487562
20	TAF1	chr14:105487668-105488373	Hela-S3	cervix:	n/a	n/a
21	GTF2F1	chr14:105487712-105488485	Hela-S3	cervix:	n/a	n/a
22	SIN3AK20	chr14:105488001-105488322	HepG2	liver:	n/a	n/a
23	FOS	chr14:105488126-105488322	MCF10A-Er-Src	breast:	n/a	n/a
24	CTCF	chr14:105488193-105488295	LNCaP	prostate:	n/a	n/a
25	POLR2A	chr14:105487666-105488387	HepG2	liver:	n/a	n/a
26	CTCFL	chr14:105488172-105488269	K562	blood:	n/a	n/a
27	CTCF	chr14:105488200-105488350	HEK293	kidney:	n/a	n/a
28	CTCF	chr14:105488031-105488525	MCF-7	breast:	n/a	n/a
29	TBL1XR1	chr14:105487238-105488476	K562	blood:	n/a	n/a
30	TBP	chr14:105487205-105488401	H1-hESC	embryonic stem cell:	n/a	n/a
31	CTCF	chr14:105488120-105488270	GM12874	blood:	n/a	n/a
32	MAX	chr14:105487163-105488395	A549	lung:	n/a	chr14:105487772-105487781 chr14:105487761-105487777 chr14:105488011-105488018 chr14:105487769-105487779 chr14:105488235-105488244 chr14:105487768-105487777 chr14:105488007-105488020
33	CTCF	chr14:105488141-105488345	GM19239	blood:	n/a	n/a
34	POLR2A	chr14:105487164-105488374	GM12878	blood:	n/a	n/a
35	ETS1	chr14:105487582-105488310	A549	lung:	n/a	n/a
36	MTA3	chr14:105487817-105488427	GM12878	blood:	n/a	n/a
37	CTCF	chr14:105488200-105488350	GM12864	blood:	n/a	n/a
38	CTCF	chr14:105488160-105488310	GM12869	blood:	n/a	n/a
39	BCL3	chr14:105487663-105488547	A549	lung:	n/a	n/a
40	PML	chr14:105488014-105488288	GM12878	blood:	n/a	n/a
41	CTCF	chr14:105488180-105488330	GM12874	blood:	n/a	n/a
42	MXI1	chr14:105487587-105488402	K562	blood:	n/a	chr14:105487771-105487780 chr14:105487769-105487778
43	POLR2A	chr14:105487644-105488472	K562	blood:	n/a	n/a
44	CTCF	chr14:105488108-105488368	MCF-7	breast:	n/a	n/a
45	CTCF	chr14:105488120-105488270	GM12864	blood:	n/a	n/a
46	STAT1	chr14:105487349-105488315	GM12878	blood:	n/a	chr14:105487868-105487880
47	RAD21	chr14:105488054-105488420	Hela-S3	cervix:	n/a	chr14:105488092-105488106 chr14:105488094-105488108
48	E2F4	chr14:105487232-105488471	MCF10A-Er-Src	breast:	n/a	chr14:105487754-105487763 chr14:105487505-105487514 chr14:105487575-105487586 chr14:105487576-105487588 chr14:105487525-105487534 chr14:105487553-105487562
49	CHD2	chr14:105487270-105488366	Hela-S3	cervix:	n/a	chr14:105487685-105487695 chr14:105487433-105487443 chr14:105487428-105487438
50	CTCF	chr14:105488140-105488290	NHEK	skin:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr14:105448840..105458160-chr14:105477229..105492100,32	MCF-7	breast:
2	chr14:105486497..105489125-chr17:57923024..57925819,2	MCF-7	breast:
3	chr14:105436785..105438892-chr14:105486187..105488298,2	MCF-7	breast:
4	chr14:105487513..105488363-chr7:44836077..44836628,2	HCT-116	colon:
5	chr1:32478407..32481120-chr14:105486396..105489029,2	MCF-7	breast:
6	chr14:105488161..105488707-chr14:105511957..105512657,2	MCF-7	breast:
7	chr14:105487916..105489481-chr16:89626019..89628336,2	MCF-7	breast:
8	chr14:105266268..105268334-chr14:105486957..105488737,2	K562	blood:
9	chr14:105486934..105489265-chr14:106372865..106374868,2	MCF-7	breast:
10	chr14:105487526..105488276-chr19:2476312..2477221,2	HCT-116	colon:
11	chr11:61099687..61101832-chr14:105486537..105488632,2	MCF-7	breast:
12	chr14:105440890..105445623-chr14:105485614..105489562,6	MCF-7	breast:
13	chr14:105487778..105490193-chr14:105767272..105770165,2	MCF-7	breast:
14	chr14:105487751..105489658-chr14:105685991..105688181,2	MCF-7	breast:
15	chr14:105346758..105349135-chr14:105488164..105490065,2	MCF-7	breast:
16	chr14:105452399..105454814-chr14:105486903..105489011,2	K562	blood:
17	chr14:105452399..105454972-chr14:105485871..105488403,3	K562	blood:
18	chr14:105487558..105490083-chr14:105516106..105518275,3	MCF-7	breast:
19	chr13:30994882..30996624-chr14:105486815..105488423,2	MCF-7	breast:
20	chr14:105433937..105458439-chr14:105476653..105492775,70	MCF-7	breast:
21	chr14:105485865..105488702-chr14:105521834..105523359,2	K562	blood:
22	chr14:105486944..105489300-chr14:105953502..105956286,2	MCF-7	breast:
23	chr14:105487927..105490765-chr17:57920099..57922115,2	MCF-7	breast:
24	chr14:105329781..105332832-chr14:105486734..105489071,3	MCF-7	breast:

Variant related genes	Relation type
CDCA4	TF binding region
ENSG00000185567	Chromatin interaction
ENSG00000185024	Chromatin interaction
ENSG00000167526	Chromatin interaction
ENSG00000099860	Chromatin interaction
ENSG00000185347	Chromatin interaction
ENSG00000121774	Chromatin interaction
ENSG00000257341	Chromatin interaction
ENSG00000211925	Chromatin interaction
ENSG00000213145	Chromatin interaction
ENSG00000167986	Chromatin interaction
ENSG00000140104	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000179627	Chromatin interaction
ENSG00000196262	Chromatin interaction
ENSG00000225039	Chromatin interaction
ENSG00000183484	Chromatin interaction
ENSG00000099814	Chromatin interaction
ENSG00000200084	Chromatin interaction
ENSG00000149476	Chromatin interaction

Extended variants
information (count: 66 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10136586	0.96[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.82[YRI][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10143022	0.90[CEU][hapmap];0.84[CHB][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10143079	0.96[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.83[YRI][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10144833	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10147484	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10147672	0.88[CEU][hapmap];0.90[CHB][hapmap];0.80[GIH][hapmap];0.97[LWK][hapmap];0.87[MEX][hapmap];0.92[MKK][hapmap];0.91[TSI][hapmap];0.92[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10162501	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11160831	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11160832	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628967	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12431580	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12889428	0.86[JPT][hapmap]
rs28391579	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3803294	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3923888	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3924892	0.83[ASW][hapmap];0.92[CEU][hapmap];0.90[CHB][hapmap];0.80[GIH][hapmap];0.97[LWK][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4075085	0.87[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4075087	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4288933	0.86[JPT][hapmap]
rs4359377	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4570772	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4577017	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4577018	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61996057	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61997770	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61997771	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6576069	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6576071	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6576072	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7140920	0.89[ASN][1000 genomes]
rs7144647	0.85[JPT][hapmap]
rs7146925	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7147669	0.86[JPT][hapmap]
rs7150715	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7151377	0.97[ASN][1000 genomes]
rs7157567	0.86[JPT][hapmap]
rs7157970	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7159328	0.96[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.84[YRI][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7159532	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7159920	0.84[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap]
rs9324080	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9652309	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1828345	chr14:105100787-105803170	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
2	nsv542225	chr14:105133688-105803170	Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
3	nsv542227	chr14:105157572-105803170	Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	147 gene(s)	inside rSNPs	diseases
4	nsv917106	chr14:105339195-105803170	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	94 gene(s)	inside rSNPs	diseases
5	nsv902419	chr14:105381763-105494262	Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
6	nsv456457	chr14:105404384-105555396	Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
7	nsv566141	chr14:105404384-105555396	Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
8	nsv902420	chr14:105410183-105494262	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
9	nsv902421	chr14:105410183-105574843	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
10	nsv902422	chr14:105420215-105803170	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
11	nsv1052190	chr14:105423761-105722653	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	81 gene(s)	inside rSNPs	diseases
12	nsv902423	chr14:105430890-105803170	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
13	nsv1042303	chr14:105435649-105633544	Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
14	nsv456458	chr14:105435649-105690092	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
15	nsv566150	chr14:105435649-105690092	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
16	nsv902424	chr14:105436222-105803170	Genic enhancers Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	86 gene(s)	inside rSNPs	diseases
17	nsv566151	chr14:105459140-105555396	Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
18	nsv456459	chr14:105459140-105617891	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
19	nsv566152	chr14:105459140-105617891	Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
20	nsv902425	chr14:105463936-105690092	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
21	nsv983941	chr14:105485574-105534240	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
22	esv3421474	chr14:105485932-105488480	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region	32 gene(s)	inside rSNPs	diseases
23	esv3437595	chr14:105486432-105489280	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	32 gene(s)	inside rSNPs	diseases
24	esv3416622	chr14:105486557-105488955	Flanking Active TSS Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	32 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs4635277	C14orf79	cis	Artery Tibial	GTEx
rs4635277	C14orf79	cis	Esophagus Mucosa	GTEx
rs4635277	DIO3OS	cis	parietal	SCAN
rs4635277	TRMT61A	cis	parietal	SCAN
rs4635277	AHNAK2	cis	cerebellum	SCAN
rs4635277	DYNC1H1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:105485800-105488800	Active TSS	H1 Cell Line	embryonic stem cell
2	chr14:105485800-105489000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr14:105486000-105488600	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr14:105486000-105488800	Active TSS	H9 Cell Line	embryonic stem cell
5	chr14:105486000-105488800	Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr14:105486000-105488800	Active TSS	HUES6 Cell Line	embryonic stem cell
7	chr14:105486000-105489000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:105486000-105489000	Active TSS	GM12878-XiMat	blood
9	chr14:105486200-105488400	Active TSS	iPS-20b Cell Line	embryonic stem cell
10	chr14:105486200-105488600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
11	chr14:105486200-105488600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr14:105486200-105488600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr14:105486200-105488800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr14:105486200-105489000	Active TSS	HUES64 Cell Line	embryonic stem cell
15	chr14:105486400-105488400	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr14:105486400-105488400	Active TSS	Fetal Lung	lung
17	chr14:105486400-105488400	Active TSS	Ovary	ovary
18	chr14:105486400-105488600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr14:105486400-105488600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr14:105486400-105488800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr14:105486400-105488800	Active TSS	iPS-18 Cell Line	embryonic stem cell
22	chr14:105486400-105488800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
23	chr14:105486600-105488400	Active TSS	Fetal Intestine Large	intestine
24	chr14:105486600-105488400	Active TSS	Small Intestine	intestine
25	chr14:105486600-105488600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr14:105486600-105488600	Active TSS	K562	blood
27	chr14:105486800-105488400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr14:105486800-105489200	Active TSS	A549	lung
29	chr14:105487000-105488400	Active TSS	Right Atrium	heart
30	chr14:105487000-105488600	Active TSS	Right Ventricle	heart
31	chr14:105487200-105488800	Active TSS	iPS-15b Cell Line	embryonic stem cell
32	chr14:105487400-105488400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr14:105487800-105488400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
34	chr14:105487800-105488400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
35	chr14:105487800-105488400	Flanking Active TSS	Primary B cells from cord blood	blood
36	chr14:105487800-105488400	Flanking Active TSS	Primary B cells from peripheral blood	blood
37	chr14:105487800-105488400	Flanking Active TSS	Primary hematopoietic stem cells	blood
38	chr14:105487800-105488400	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr14:105487800-105488400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
40	chr14:105487800-105488400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
41	chr14:105487800-105488400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
42	chr14:105487800-105488400	Active TSS	Fetal Heart	heart
43	chr14:105487800-105488400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
44	chr14:105487800-105488600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
45	chr14:105487800-105488600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
46	chr14:105487800-105488600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
47	chr14:105487800-105488600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr14:105487800-105488600	Flanking Active TSS	Adipose Nuclei	Adipose
49	chr14:105487800-105488600	Active TSS	Fetal Kidney	kidney
50	chr14:105487800-105488600	Flanking Active TSS	Placenta	Placenta

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