The 2.0 version of rSNPBase

Variant report

Variant rs4647416
Chromosome Location chr9:98010454-98010455
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:97973600-98024000 Weak transcription Gastric stomach
2 chr9:97981400-98012400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:97983400-98012400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr9:97987200-98015400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr9:97988400-98012200 Weak transcription Fetal Kidney kidney
6 chr9:97989200-98012400 Weak transcription Ovary ovary
7 chr9:97989400-98012400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr9:97989400-98013400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr9:97989600-98012200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:97989800-98011200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr9:97990200-98013400 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr9:97990400-98012600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr9:97991200-98024000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr9:97992600-98013400 Weak transcription Liver Liver
15 chr9:97994200-98011400 Weak transcription Hela-S3 cervix
16 chr9:97994800-98011200 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr9:97994800-98017200 Weak transcription Primary hematopoietic stem cells blood
18 chr9:97995400-98012800 Weak transcription HSMM muscle
19 chr9:97996400-98012400 Weak transcription Psoas Muscle Psoas
20 chr9:97996800-98012800 Weak transcription HSMMtube muscle
21 chr9:97997600-98012400 Weak transcription Fetal Brain Male brain
22 chr9:97999800-98019000 Weak transcription Aorta Aorta
23 chr9:98001200-98012400 Weak transcription Rectal Smooth Muscle rectum
24 chr9:98002400-98015200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr9:98002600-98012400 Weak transcription Esophagus oesophagus
26 chr9:98004000-98011200 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr9:98004800-98012200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr9:98005200-98012400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr9:98005400-98012400 Weak transcription Fetal Thymus thymus
30 chr9:98005400-98013000 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr9:98005600-98012400 Weak transcription Colon Smooth Muscle Colon
32 chr9:98005600-98012400 Weak transcription HepG2 liver
33 chr9:98006000-98016800 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr9:98007000-98012400 Weak transcription Brain Germinal Matrix brain
35 chr9:98007000-98013200 Weak transcription Brain Hippocampus Middle brain
36 chr9:98007400-98024000 Weak transcription Small Intestine intestine
37 chr9:98007600-98011600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:98008000-98011200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr9:98008000-98012600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr9:98008200-98010600 Weak transcription Placenta Placenta
41 chr9:98008400-98012200 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr9:98008600-98010800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr9:98008600-98012400 Weak transcription Right Atrium heart
44 chr9:98009000-98011600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr9:98009000-98018000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr9:98009000-98026600 Weak transcription A549 lung
47 chr9:98009200-98011000 Weak transcription Thymus Thymus
48 chr9:98009200-98011400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr9:98009200-98012400 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr9:98009200-98012400 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015