Variant report

Variant	rs4649922
Chromosome Location	chr1:71021668-71021669
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10889881	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11209638	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11209640	0.91[EUR][1000 genomes]
rs12088046	0.98[ASN][1000 genomes]
rs12088376	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12408658	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12410281	0.82[EUR][1000 genomes]
rs12410474	0.82[EUR][1000 genomes]
rs12410598	0.82[EUR][1000 genomes]
rs17131347	0.82[EUR][1000 genomes]
rs17131349	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4130190	0.90[EUR][1000 genomes]
rs4130191	0.91[EUR][1000 genomes]
rs4311837	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4366272	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4478767	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4625232	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4649925	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4649926	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4649927	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4650065	0.82[EUR][1000 genomes]
rs4650067	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4650068	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56181352	0.82[EUR][1000 genomes]
rs59705016	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72682644	0.82[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71012600-71059800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:71020600-71023800	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr1:71021400-71022000	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr1:71021400-71022200	Enhancers	H1 Cell Line	embryonic stem cell
5	chr1:71021400-71022400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr1:71021400-71023000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr1:71021400-71023000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr1:71021400-71023200	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr1:71021600-71022200	Enhancers	H9 Cell Line	embryonic stem cell
10	chr1:71021600-71023000	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr1:71021600-71023000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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