The 2.0 version of rSNPBase

Variant report

Variant rs4652536
Chromosome Location chr1:180849639-180849640
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180773800-180853200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:180779800-180850800 Weak transcription Small Intestine intestine
3 chr1:180796400-180851000 Weak transcription Fetal Intestine Small intestine
4 chr1:180805800-180881000 Weak transcription Aorta Aorta
5 chr1:180812200-180867000 Weak transcription Ovary ovary
6 chr1:180819200-180851000 Weak transcription Fetal Brain Male brain
7 chr1:180822000-180862800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:180822800-180862800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:180823000-180854600 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr1:180823600-180860000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:180823800-180851000 Weak transcription Fetal Kidney kidney
12 chr1:180823800-180851400 Weak transcription Pancreas Pancrea
13 chr1:180823800-180862600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:180824000-180867600 Weak transcription Fetal Muscle Leg muscle
15 chr1:180824000-180880800 Weak transcription Right Ventricle heart
16 chr1:180824200-180851000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:180827800-180856600 Weak transcription Primary hematopoietic stem cells blood
18 chr1:180828000-180852400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:180828000-180853200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:180828000-180853200 Weak transcription NHEK skin
21 chr1:180828600-180867800 Weak transcription HSMM muscle
22 chr1:180828800-180851000 Weak transcription Brain Germinal Matrix brain
23 chr1:180830000-180867600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:180831000-180851400 Weak transcription Fetal Thymus thymus
25 chr1:180831200-180858600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:180831600-180851000 Weak transcription Brain Angular Gyrus brain
27 chr1:180831600-180852600 Weak transcription Fetal Lung lung
28 chr1:180832400-180850000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:180832400-180850000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:180832400-180850800 Weak transcription Brain Hippocampus Middle brain
31 chr1:180832400-180850800 Weak transcription NH-A brain
32 chr1:180832400-180851000 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:180832400-180851000 Weak transcription Brain Anterior Caudate brain
34 chr1:180832400-180853200 Weak transcription Fetal Stomach stomach
35 chr1:180832600-180854400 Weak transcription Liver Liver
36 chr1:180832800-180861800 Weak transcription HepG2 liver
37 chr1:180833200-180851000 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:180834200-180851000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:180834800-180855800 Weak transcription Gastric stomach
40 chr1:180835400-180862800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr1:180835600-180855400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:180835800-180856600 Weak transcription Fetal Intestine Large intestine
43 chr1:180835800-180858800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:180835800-180861600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:180835800-180870400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:180839400-180851000 Weak transcription Brain Cingulate Gyrus brain
47 chr1:180840800-180851000 Weak transcription HSMMtube muscle
48 chr1:180841000-180850800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:180841000-180867800 Weak transcription Lung lung
50 chr1:180841800-180851200 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015