Variant report

Variant rs4654216
Chromosome Location chr1:246330176-246330177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246314200-246369000 Weak transcription Aorta Aorta
2 chr1:246321600-246344000 Weak transcription Primary hematopoietic stem cells blood
3 chr1:246325600-246342000 Weak transcription Primary T cells from cord blood blood
4 chr1:246326200-246339600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:246327200-246340200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:246327400-246332200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:246327600-246341600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:246327800-246330400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:246329000-246341800 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr1:246329200-246330400 Enhancers Fetal Intestine Large intestine
11 chr1:246329200-246330400 Enhancers Rectal Mucosa Donor 31 rectum
12 chr1:246329200-246330400 Enhancers HepG2 liver
13 chr1:246329400-246330200 Enhancers Pancreatic Islets Pancreatic Islet
14 chr1:246329400-246330200 Enhancers A549 lung
15 chr1:246329400-246330600 Flanking Active TSS NHEK skin
16 chr1:246329600-246330200 Enhancers Fetal Heart heart
17 chr1:246329600-246330400 Enhancers Pancreas Pancrea
18 chr1:246329600-246330400 Enhancers Rectal Mucosa Donor 29 rectum
19 chr1:246329600-246330400 Flanking Active TSS K562 blood
20 chr1:246329800-246330800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:246329800-246330800 Strong transcription Osteobl bone
22 chr1:246330000-246330200 Enhancers Fetal Kidney kidney
23 chr1:246330000-246330600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:246330000-246330600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin

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