The 2.0 version of rSNPBase

Variant report

Variant rs4669512
Chromosome Location chr2:10101945-10101946
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10092600-10104200 Weak transcription Lung lung
2 chr2:10092600-10112600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:10092600-10113400 Weak transcription Left Ventricle heart
4 chr2:10092800-10110600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr2:10093200-10105600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:10093200-10110600 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr2:10093600-10104400 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:10093600-10112600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:10094800-10104400 Weak transcription Fetal Intestine Small intestine
10 chr2:10094800-10110400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr2:10094800-10124400 Weak transcription Fetal Intestine Large intestine
12 chr2:10095000-10105400 Weak transcription Pancreas Pancrea
13 chr2:10095000-10112600 Weak transcription Hela-S3 cervix
14 chr2:10095200-10104000 Weak transcription Gastric stomach
15 chr2:10096000-10104000 Weak transcription Esophagus oesophagus
16 chr2:10099000-10110000 Strong transcription Placenta Placenta
17 chr2:10099000-10115400 Strong transcription Liver Liver
18 chr2:10100000-10105400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr2:10100600-10102200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:10100600-10102200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:10101000-10102000 Strong transcription Dnd41 blood
22 chr2:10101000-10102400 Active TSS Brain Inferior Temporal Lobe brain
23 chr2:10101000-10113200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr2:10101000-10117000 Strong transcription HepG2 liver
25 chr2:10101200-10102200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr2:10101200-10102200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
27 chr2:10101200-10106800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:10101400-10104000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr2:10101400-10110400 Weak transcription Fetal Muscle Leg muscle
30 chr2:10101400-10110400 Weak transcription Fetal Stomach stomach
31 chr2:10101400-10144800 Weak transcription Brain Germinal Matrix brain
32 chr2:10101600-10102000 Active TSS Fetal Brain Female brain
33 chr2:10101600-10104000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr2:10101600-10104000 Weak transcription K562 blood
35 chr2:10101600-10104200 Weak transcription Adipose Nuclei Adipose
36 chr2:10101600-10110600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr2:10101600-10113000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:10101600-10116400 Weak transcription Brain Cingulate Gyrus brain
39 chr2:10101600-10136400 Weak transcription Brain Angular Gyrus brain
40 chr2:10101800-10114800 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015