The 2.0 version of rSNPBase

Variant report

Variant rs4669544
Chromosome Location chr2:10299314-10299315
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10269600-10299400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr2:10271400-10303800 Weak transcription Primary hematopoietic stem cells blood
3 chr2:10273800-10330400 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr2:10276400-10307400 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:10276600-10301800 Weak transcription Osteobl bone
6 chr2:10277600-10321600 Weak transcription K562 blood
7 chr2:10278000-10302200 Weak transcription HSMM muscle
8 chr2:10278000-10311800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr2:10282200-10316600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr2:10284400-10299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:10285000-10299400 Weak transcription Fetal Lung lung
12 chr2:10285200-10299800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:10285400-10302000 Weak transcription HMEC breast
14 chr2:10285600-10307400 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:10285800-10310400 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr2:10286200-10299600 Weak transcription Brain Germinal Matrix brain
17 chr2:10286400-10301800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:10286400-10331400 Weak transcription Spleen Spleen
19 chr2:10286600-10304000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr2:10286800-10299400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr2:10286800-10312400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr2:10287000-10301800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:10287000-10303800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:10287000-10312000 Weak transcription H1 Cell Line embryonic stem cell
25 chr2:10288400-10307600 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr2:10290200-10299600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:10290200-10300400 Weak transcription Duodenum Mucosa Duodenum
28 chr2:10290200-10351400 Strong transcription Dnd41 blood
29 chr2:10293000-10307600 Weak transcription Gastric stomach
30 chr2:10293400-10302800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr2:10295400-10306400 Strong transcription Thymus Thymus
32 chr2:10296000-10302000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:10296000-10303800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:10296200-10299400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:10296200-10300000 Weak transcription Fetal Brain Female brain
36 chr2:10296200-10300600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr2:10296200-10310200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr2:10296200-10314400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr2:10296400-10310400 Weak transcription Hela-S3 cervix
40 chr2:10296400-10312400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr2:10296400-10312600 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr2:10296800-10303600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:10296800-10304400 Weak transcription HepG2 liver
44 chr2:10296800-10309800 Weak transcription A549 lung
45 chr2:10297000-10299400 Weak transcription Fetal Stomach stomach
46 chr2:10297000-10300600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr2:10298400-10300600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:10298600-10299600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:10298800-10300200 Enhancers Brain Hippocampus Middle brain
50 chr2:10298800-10300800 Bivalent Enhancer Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015