Variant report

Variant	rs4688104
Chromosome Location	chr3:118154526-118154527
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11708487	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12330594	0.92[EUR][1000 genomes]
rs13319845	0.91[EUR][1000 genomes]
rs13326806	0.92[EUR][1000 genomes]
rs1447592	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1827180	0.94[EUR][1000 genomes]
rs2946799	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4688105	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9813744	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9815320	0.92[EUR][1000 genomes]
rs9834379	0.92[EUR][1000 genomes]
rs9880484	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9882733	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524029	chr3:118154526-118157095	Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:118154200-118154600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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